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biology/samtools: Update to 1.22

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Numerous fixes and enhancements
Changes: https://github.com/samtools/samtools/releases
Update by: Hayzam Sherif

Reported by:    portscout
This commit is contained in:
Jason W. Bacon 2025-06-04 08:22:26 -05:00
parent c8a79b9a3b
commit 3c62a68368
3 changed files with 6 additions and 5 deletions
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4
biology/samtools/Makefile
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@ -1,5 +1,5 @@
PORTNAME= samtools PORTNAME= samtools
DISTVERSION= 1.21 DISTVERSION= 1.22
CATEGORIES= biology CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org MAINTAINER= jwb@FreeBSD.org
@ -9,7 +9,7 @@ WWW= https://www.htslib.org/
LICENSE= MIT LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= htslib>=1.21:biology/htslib BUILD_DEPENDS= htslib>=1.22:biology/htslib
LIB_DEPENDS= libhts.so:biology/htslib LIB_DEPENDS= libhts.so:biology/htslib
TEST_DEPENDS= bash:shells/bash TEST_DEPENDS= bash:shells/bash

6
biology/samtools/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1727437810 TIMESTAMP = 1748951307
SHA256 (samtools-samtools-1.21_GH0.tar.gz) = b327b85d3d60771ede370c8bcae0570e7704da39abddfe8e930a85b80aabffac SHA256 (samtools-samtools-1.22_GH0.tar.gz) = dbe62a97d19634a930033ce302b340a5109263efc371b83481182385a98bcdda
SIZE (samtools-samtools-1.21_GH0.tar.gz) = 5682709 SIZE (samtools-samtools-1.22_GH0.tar.gz) = 5742299

1
biology/samtools/pkg-plist
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@ -26,6 +26,7 @@ share/man/man1/samtools-ampliconstats.1.gz
share/man/man1/samtools-bedcov.1.gz share/man/man1/samtools-bedcov.1.gz
share/man/man1/samtools-calmd.1.gz share/man/man1/samtools-calmd.1.gz
share/man/man1/samtools-cat.1.gz share/man/man1/samtools-cat.1.gz
share/man/man1/samtools-checksum.1.gz
share/man/man1/samtools-collate.1.gz share/man/man1/samtools-collate.1.gz
share/man/man1/samtools-consensus.1.gz share/man/man1/samtools-consensus.1.gz
share/man/man1/samtools-coverage.1.gz share/man/man1/samtools-coverage.1.gz