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biology/gatk: Update TEST_ENV

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This commit is contained in:
Yuri Victorovich 2024-11-01 12:00:19 -07:00
parent f2b6c11eb8
commit 537eccbc55
1 changed files with 3 additions and 1 deletions
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4
biology/gatk/Makefile
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@ -31,7 +31,9 @@ NO_ARCH= yes
DEPS_CACHE_DIR= ${WRKDIR}
TEST_ENV= ${MAKE_ENV} JAVA_TOOL_OPTIONS="-DLIBBWA_PATH=${PREFIX}/lib/libfml.so"
TEST_ENV= ${MAKE_ENV} \
JAVA_TOOL_OPTIONS="-DLIBBWA_PATH=${PREFIX}/lib/libfml.so" \
GATK_LOCAL_JAR=${STAGEDIR}${JAVAJARDIR}/GenomeAnalysisTK-${PORTVERSION}.jar
PLIST_FILES= bin/${PORTNAME} \
${JAVAJARDIR}/GenomeAnalysisTK-${PORTVERSION}.jar