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science/{,py-}gemmi: update 0.6.3 → 0.6.4

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Reported by:	portscout
This commit is contained in:
Yuri Victorovich 2023-12-14 12:56:08 -08:00
parent ba33e2445b
commit ce82996724
7 changed files with 111 additions and 78 deletions
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3
science/gemmi/Makefile
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@ -1,6 +1,6 @@
PORTNAME= gemmi PORTNAME= gemmi
DISTVERSIONPREFIX= v DISTVERSIONPREFIX= v
DISTVERSION= 0.6.3 DISTVERSION= 0.6.4
CATEGORIES= science # chemistry CATEGORIES= science # chemistry
MAINTAINER= yuri@FreeBSD.org MAINTAINER= yuri@FreeBSD.org
@ -16,6 +16,7 @@ USE_GITHUB= yes
GH_ACCOUNT= project-gemmi GH_ACCOUNT= project-gemmi
CMAKE_ON= BUILD_SHARED_LIBS CMAKE_ON= BUILD_SHARED_LIBS
CMAKE_ARGS= -DCMAKE_CXX_VISIBILITY_PRESET=default # for the Python extension science/py-gemmi to see all symbols
CMAKE_TESTING_TARGET= check CMAKE_TESTING_TARGET= check
OPTIONS_DEFINE= FORTRAN OPTIONS_DEFINE= FORTRAN

6
science/gemmi/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1694327240 TIMESTAMP = 1702577537
SHA256 (project-gemmi-gemmi-v0.6.3_GH0.tar.gz) = d7fa5e2a96f2093900a8ceaf835d2761562b5c42403e3f4cc98d32bb94f6a091 SHA256 (project-gemmi-gemmi-v0.6.4_GH0.tar.gz) = 507eea6ea112e2b142cc3dfa7de20c25e9f34c76ef77ef3caabfaf94d3657cb3
SIZE (project-gemmi-gemmi-v0.6.3_GH0.tar.gz) = 1756098 SIZE (project-gemmi-gemmi-v0.6.4_GH0.tar.gz) = 1778062

1
science/gemmi/pkg-plist
View File

@ -77,6 +77,7 @@ include/gemmi/scaling.hpp
include/gemmi/select.hpp include/gemmi/select.hpp
include/gemmi/seqalign.hpp include/gemmi/seqalign.hpp
include/gemmi/seqid.hpp include/gemmi/seqid.hpp
include/gemmi/seqtools.hpp
include/gemmi/sfcalc.hpp include/gemmi/sfcalc.hpp
include/gemmi/small.hpp include/gemmi/small.hpp
include/gemmi/smcif.hpp include/gemmi/smcif.hpp

5
science/py-gemmi/Makefile
View File

@ -1,6 +1,6 @@
PORTNAME= gemmi PORTNAME= gemmi
DISTVERSIONPREFIX= v DISTVERSIONPREFIX= v
DISTVERSION= 0.6.3 DISTVERSION= 0.6.4
CATEGORIES= science python CATEGORIES= science python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -16,6 +16,7 @@ BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pip>0:devel/py-pip@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \
pybind11>=2.6:devel/pybind11 pybind11>=2.6:devel/pybind11
LIB_DEPENDS= libgemmi_cpp.so:science/gemmi LIB_DEPENDS= libgemmi_cpp.so:science/gemmi
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}biopython>0:biology/py-biopython@${PY_FLAVOR}
USES= cmake compiler:c++20-lang localbase:ldflags python USES= cmake compiler:c++20-lang localbase:ldflags python
USE_PYTHON= flavors USE_PYTHON= flavors
@ -32,7 +33,7 @@ TEST_WRKSRC= ${BUILD_WRKSRC}/tests
PLIST_SUB= VER=${PORTVERSION} PLIST_SUB= VER=${PORTVERSION}
do-test: do-test: # 1 test fails, see https://github.com/project-gemmi/gemmi/issues/291
@cd ${WRKSRC} && ${SETENV} ${TEST_ENV} ${PYTHON_CMD} -m unittest discover -v tests/ @cd ${WRKSRC} && ${SETENV} ${TEST_ENV} ${PYTHON_CMD} -m unittest discover -v tests/
.include <bsd.port.mk> .include <bsd.port.mk>

6
science/py-gemmi/distinfo
View File

@ -1,3 +1,3 @@
TIMESTAMP = 1694328516 TIMESTAMP = 1702578897
SHA256 (project-gemmi-gemmi-v0.6.3_GH0.tar.gz) = d7fa5e2a96f2093900a8ceaf835d2761562b5c42403e3f4cc98d32bb94f6a091 SHA256 (project-gemmi-gemmi-v0.6.4_GH0.tar.gz) = 507eea6ea112e2b142cc3dfa7de20c25e9f34c76ef77ef3caabfaf94d3657cb3
SIZE (project-gemmi-gemmi-v0.6.3_GH0.tar.gz) = 1756098 SIZE (project-gemmi-gemmi-v0.6.4_GH0.tar.gz) = 1778062

137
science/py-gemmi/files/patch-CMakeLists.txt
View File

@ -1,62 +1,107 @@
--- CMakeLists.txt.orig 2023-09-07 09:12:22 UTC --- CMakeLists.txt.orig 2023-12-13 10:39:37 UTC
+++ CMakeLists.txt +++ CMakeLists.txt
@@ -187,21 +187,22 @@ if (GEMMI_VERSION_INFO) @@ -6,7 +6,7 @@ file(STRINGS "${CMAKE_CURRENT_SOURCE_DIR}/include/gemm
target_compile_definitions(options PRIVATE GEMMI_VERSION_INFO=${GEMMI_VERSION_INFO}) string(REGEX REPLACE ".+\"([0-9]+\.[0-9]+\.[0-9]+)(-dev)?\"" "\\1"
endif() gemmi_version_str ${gemmi_version_line})
-project(gemmi LANGUAGES C CXX VERSION ${gemmi_version_str})
+project(gemmi_python LANGUAGES C CXX VERSION ${gemmi_version_str})
message(STATUS "Gemmi version ${PROJECT_VERSION}")
include(GNUInstallDirs) # for CMAKE_INSTALL_LIBDIR, etc
@@ -176,37 +176,39 @@ endif()
# target_link_libraries(fgemmi PRIVATE cgemmi)
#endif()
-add_library(gemmi_headers INTERFACE)
-add_library(gemmi::headers ALIAS gemmi_headers)
-target_include_directories(gemmi_headers INTERFACE
- "$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>"
- "$<INSTALL_INTERFACE:${CMAKE_INSTALL_INCLUDEDIR}>")
-target_compile_features(gemmi_headers INTERFACE cxx_std_11)
-set_target_properties(gemmi_headers PROPERTIES EXPORT_NAME headers)
+#add_library(gemmi_headers INTERFACE)
+#add_library(gemmi::headers ALIAS gemmi_headers)
+#target_include_directories(gemmi_headers INTERFACE
+# "$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>"
+# "$<INSTALL_INTERFACE:${CMAKE_INSTALL_INCLUDEDIR}>")
+#target_compile_features(gemmi_headers INTERFACE cxx_std_11)
+#set_target_properties(gemmi_headers PROPERTIES EXPORT_NAME headers)
-add_library(gemmi_cpp -add_library(gemmi_cpp
- src/assembly.cpp src/calculate.cpp src/crd.cpp - src/align.cpp src/assembly.cpp src/calculate.cpp src/crd.cpp
- src/ddl.cpp src/eig3.cpp - src/ddl.cpp src/eig3.cpp
- src/mmcif.cpp src/mmread_gz.cpp src/mtz.cpp src/mtz2cif.cpp - src/mmcif.cpp src/mmread_gz.cpp src/mtz.cpp src/mtz2cif.cpp
- src/polyheur.cpp src/read_cif.cpp src/resinfo.cpp - src/polyheur.cpp src/read_cif.cpp src/resinfo.cpp
- src/riding_h.cpp src/sprintf.cpp src/to_mmcif.cpp - src/riding_h.cpp src/sprintf.cpp src/to_mmcif.cpp
- src/to_pdb.cpp src/monlib.cpp src/topo.cpp src/xds_ascii.cpp) - src/to_pdb.cpp src/monlib.cpp src/topo.cpp src/xds_ascii.cpp)
-add_library(gemmi::gemmi_cpp ALIAS gemmi_cpp)
-set_property(TARGET gemmi_cpp PROPERTY POSITION_INDEPENDENT_CODE ON) -set_property(TARGET gemmi_cpp PROPERTY POSITION_INDEPENDENT_CODE ON)
+#add_library(gemmi_cpp +#add_library(gemmi_cpp
+# src/assembly.cpp src/calculate.cpp src/crd.cpp +# src/align.cpp src/assembly.cpp src/calculate.cpp src/crd.cpp
+# src/ddl.cpp src/eig3.cpp +# src/ddl.cpp src/eig3.cpp
+# src/mmcif.cpp src/mmread_gz.cpp src/mtz.cpp src/mtz2cif.cpp +# src/mmcif.cpp src/mmread_gz.cpp src/mtz.cpp src/mtz2cif.cpp
+# src/polyheur.cpp src/read_cif.cpp src/resinfo.cpp +# src/polyheur.cpp src/read_cif.cpp src/resinfo.cpp
+# src/riding_h.cpp src/sprintf.cpp src/to_mmcif.cpp +# src/riding_h.cpp src/sprintf.cpp src/to_mmcif.cpp
+# src/to_pdb.cpp src/monlib.cpp src/topo.cpp src/xds_ascii.cpp) +# src/to_pdb.cpp src/monlib.cpp src/topo.cpp src/xds_ascii.cpp)
+#add_library(gemmi::gemmi_cpp ALIAS gemmi_cpp)
+#set_property(TARGET gemmi_cpp PROPERTY POSITION_INDEPENDENT_CODE ON) +#set_property(TARGET gemmi_cpp PROPERTY POSITION_INDEPENDENT_CODE ON)
#set_property(TARGET gemmi_cpp PROPERTY CXX_VISIBILITY_PRESET hidden) #set_property(TARGET gemmi_cpp PROPERTY CXX_VISIBILITY_PRESET hidden)
-target_compile_definitions(gemmi_cpp PRIVATE GEMMI_BUILD) -target_compile_definitions(gemmi_cpp PRIVATE GEMMI_BUILD)
-target_include_directories(gemmi_cpp PRIVATE "${CMAKE_CURRENT_SOURCE_DIR}/third_party")
+#target_compile_definitions(gemmi_cpp PRIVATE GEMMI_BUILD)
+#target_include_directories(gemmi_cpp PRIVATE "${CMAKE_CURRENT_SOURCE_DIR}/third_party")
-if (BUILD_SHARED_LIBS) -if (BUILD_SHARED_LIBS)
- target_compile_definitions(gemmi_cpp PUBLIC GEMMI_SHARED) - target_compile_definitions(gemmi_cpp PUBLIC GEMMI_SHARED)
-endif() -endif()
-target_link_libraries(gemmi_cpp PUBLIC gemmi_headers)
-support_gz(gemmi_cpp) -support_gz(gemmi_cpp)
+#target_compile_definitions(gemmi_cpp PRIVATE GEMMI_BUILD)
+#if (BUILD_SHARED_LIBS) +#if (BUILD_SHARED_LIBS)
+# target_compile_definitions(gemmi_cpp PUBLIC GEMMI_SHARED) +# target_compile_definitions(gemmi_cpp PUBLIC GEMMI_SHARED)
+#endif() +#endif()
+#target_link_libraries(gemmi_cpp PUBLIC gemmi_headers)
+#support_gz(gemmi_cpp) +#support_gz(gemmi_cpp)
+find_package(gemmi REQUIRED) +find_package(gemmi REQUIRED)
+
### programs from prog/ ###
# Gemmi subcommands compiled as individual binaries. add_library(options OBJECT prog/options.cpp)
# Not built by default and used mostly for testing. -target_link_libraries(options PUBLIC gemmi_headers)
@@ -210,7 +211,7 @@ function(add_single_prog target) +#target_link_libraries(options PUBLIC gemmi_headers)
target_include_directories(options PUBLIC "${CMAKE_CURRENT_SOURCE_DIR}/third_party")
if (GEMMI_VERSION_INFO)
target_compile_definitions(options PRIVATE GEMMI_VERSION_INFO=${GEMMI_VERSION_INFO})
@@ -218,11 +220,11 @@ function(add_single_prog target)
cmake_parse_arguments(arg "NOLIB;GZ" "ADD_SRC" "" ${ARGN})
add_executable(gemmi-${target} EXCLUDE_FROM_ALL prog/${target}.cpp ${arg_ADD_SRC} add_executable(gemmi-${target} EXCLUDE_FROM_ALL prog/${target}.cpp ${arg_ADD_SRC}
$<TARGET_OBJECTS:options>) $<TARGET_OBJECTS:options>)
if (NOT arg_NOLIB) - if (arg_NOLIB)
- target_link_libraries(gemmi-${target} PRIVATE gemmi_headers)
- else()
- target_link_libraries(gemmi-${target} PRIVATE gemmi_cpp) - target_link_libraries(gemmi-${target} PRIVATE gemmi_cpp)
- endif()
+ #if (arg_NOLIB)
+ # target_link_libraries(gemmi-${target} PRIVATE gemmi_headers)
+ #else()
+ # target_link_libraries(gemmi-${target} PRIVATE gemmi_cpp) + # target_link_libraries(gemmi-${target} PRIVATE gemmi_cpp)
endif() + #endif()
target_include_directories(gemmi-${target} PRIVATE
"${CMAKE_CURRENT_SOURCE_DIR}/third_party")
if (arg_GZ) if (arg_GZ)
support_gz(gemmi-${target}) @@ -279,7 +281,7 @@ add_executable(gemmi_prog
@@ -264,7 +265,7 @@ add_executable(gemmi_prog
prog/validate.cpp prog/validate_mon.cpp prog/wcn.cpp
prog/xds2mtz.cpp prog/xds2mtz.cpp
$<TARGET_OBJECTS:options>) $<TARGET_OBJECTS:options>)
add_executable(gemmi::prog ALIAS gemmi_prog)
-target_link_libraries(gemmi_prog PRIVATE gemmi_cpp) -target_link_libraries(gemmi_prog PRIVATE gemmi_cpp)
+#target_link_libraries(gemmi_prog PRIVATE gemmi_cpp) +target_link_libraries(gemmi_prog PRIVATE gemmi)
support_gz(gemmi_prog) support_gz(gemmi_prog)
target_include_directories(gemmi_prog PRIVATE "${CMAKE_CURRENT_SOURCE_DIR}/third_party")
target_compile_definitions(gemmi_prog PRIVATE GEMMI_ALL_IN_ONE=1) target_compile_definitions(gemmi_prog PRIVATE GEMMI_ALL_IN_ONE=1)
set_property(TARGET gemmi_prog PROPERTY OUTPUT_NAME gemmi) @@ -324,10 +326,10 @@ target_link_libraries(doc_example PRIVATE gemmi_header
@@ -304,10 +305,10 @@ add_executable(doc_example EXCLUDE_FROM_ALL
docs/code/cell.cpp src/resinfo.cpp)
add_executable(doc_example2 EXCLUDE_FROM_ALL docs/code/cif_cc.cpp) add_executable(doc_example2 EXCLUDE_FROM_ALL docs/code/cif_cc.cpp)
target_link_libraries(doc_example2 PRIVATE gemmi_headers)
add_executable(doc_maybegz EXCLUDE_FROM_ALL docs/code/maybegz.cpp docs/code/mutate.cpp) add_executable(doc_maybegz EXCLUDE_FROM_ALL docs/code/maybegz.cpp docs/code/mutate.cpp)
-target_link_libraries(doc_maybegz PRIVATE gemmi_cpp) -target_link_libraries(doc_maybegz PRIVATE gemmi_cpp)
+target_link_libraries(doc_maybegz PRIVATE gemmi) +target_link_libraries(doc_maybegz PRIVATE gemmi)
@ -67,7 +112,7 @@
support_gz(doc_newmtz) support_gz(doc_newmtz)
# always compile these tests with assertions enabled # always compile these tests with assertions enabled
@@ -316,7 +317,7 @@ if (CMAKE_CXX_COMPILER_ID MATCHES "Clang|GNU|Intel") @@ -336,7 +338,7 @@ if (CMAKE_CXX_COMPILER_ID MATCHES "Clang|GNU|Intel")
endif() endif()
add_executable(test_disulf EXCLUDE_FROM_ALL tests/disulf.cpp) add_executable(test_disulf EXCLUDE_FROM_ALL tests/disulf.cpp)
@ -76,7 +121,7 @@
support_gz(test_disulf) support_gz(test_disulf)
# auth_label requires <experimental/filesystem> and -lstdc++fs # auth_label requires <experimental/filesystem> and -lstdc++fs
@@ -327,7 +328,7 @@ endif() @@ -348,7 +350,7 @@ endif()
support_gz(auth_label) support_gz(auth_label)
add_executable(check_conn EXCLUDE_FROM_ALL examples/check_conn.cpp) add_executable(check_conn EXCLUDE_FROM_ALL examples/check_conn.cpp)
@ -85,66 +130,56 @@
enable_testing() enable_testing()
@@ -364,7 +365,7 @@ if (benchmark_FOUND) @@ -385,7 +387,7 @@ if (benchmark_FOUND)
foreach(b stoi elem mod niggli pdb resinfo round sym) foreach(b stoi elem mod niggli pdb resinfo round sym writecif)
add_executable(${b}-bm EXCLUDE_FROM_ALL benchmarks/${b}.cpp) add_executable(${b}-bm EXCLUDE_FROM_ALL benchmarks/${b}.cpp)
if (b MATCHES "resinfo|pdb") if (b MATCHES "resinfo|pdb|writecif")
- target_link_libraries(${b}-bm PRIVATE gemmi_cpp) - target_link_libraries(${b}-bm PRIVATE gemmi_cpp)
+ target_link_libraries(${b}-bm PRIVATE gemmi) + target_link_libraries(${b}-bm PRIVATE gemmi)
endif() endif()
target_link_libraries(${b}-bm PRIVATE benchmark::benchmark) target_link_libraries(${b}-bm PRIVATE gemmi_headers benchmark::benchmark)
set_property(TARGET ${b}-bm PROPERTY RUNTIME_OUTPUT_DIRECTORY set_property(TARGET ${b}-bm PROPERTY RUNTIME_OUTPUT_DIRECTORY
@@ -392,8 +393,8 @@ if (USE_PYTHON) @@ -421,9 +423,8 @@ if (USE_PYTHON)
python/mtz.cpp python/read.cpp python/recgrid.cpp python/mtz.cpp python/read.cpp python/recgrid.cpp
python/scaling.cpp python/search.cpp python/scaling.cpp python/search.cpp
python/sf.cpp python/sym.cpp python/topo.cpp python/sf.cpp python/sym.cpp python/topo.cpp
- python/unitcell.cpp python/write.cpp - python/unitcell.cpp python/write.cpp
- $<TARGET_OBJECTS:gemmi_cpp>) - $<TARGET_OBJECTS:gemmi_cpp>)
- target_link_libraries(gemmi_py PRIVATE gemmi_headers)
+ python/unitcell.cpp python/write.cpp) + python/unitcell.cpp python/write.cpp)
+ target_link_libraries(gemmi_py PRIVATE gemmi::gemmi_cpp) + target_link_libraries(gemmi_py PRIVATE gemmi::gemmi_cpp)
set_property(TARGET gemmi_py PROPERTY OUTPUT_NAME gemmi) set_property(TARGET gemmi_py PROPERTY OUTPUT_NAME gemmi)
if(CMAKE_CXX_FLAGS MATCHES "-Wshadow") if(CMAKE_CXX_FLAGS MATCHES "-Wshadow")
target_compile_options(gemmi_py PRIVATE "-Wno-shadow") target_compile_options(gemmi_py PRIVATE "-Wno-shadow")
@@ -416,21 +417,21 @@ write_basic_package_version_file(gemmi-config-version. @@ -450,19 +451,19 @@ if (BUILD_GEMMI_PROGRAM)
COMPATIBILITY AnyNewerVersion)
# In CMake 3.23 we'll be able to use FILE_SET to install the headers
-install(DIRECTORY include/gemmi DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
+#install(DIRECTORY include/gemmi DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
if (BUILD_GEMMI_PROGRAM)
install(TARGETS gemmi_prog EXPORT GemmiTargets) install(TARGETS gemmi_prog EXPORT GemmiTargets)
endif() endif()
-install(TARGETS gemmi_cpp
- EXPORT GemmiTargets
- INCLUDES DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
+#install(TARGETS gemmi_cpp
+# EXPORT GemmiTargets
+# INCLUDES DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
-if (INSTALL_DEV_FILES)
+#if (INSTALL_DEV_FILES)
# In CMake 3.23 we'll be able to use FILE_SET to install the headers
- install(DIRECTORY include/gemmi DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
- install(TARGETS gemmi_headers gemmi_cpp EXPORT GemmiTargets)
- install(EXPORT GemmiTargets FILE gemmi-targets.cmake NAMESPACE gemmi:: - install(EXPORT GemmiTargets FILE gemmi-targets.cmake NAMESPACE gemmi::
- DESTINATION "${GEMMI_INSTALL_CMAKEDIR}") - DESTINATION "${GEMMI_INSTALL_CMAKEDIR}")
- install(FILES - install(FILES
- "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config.cmake" - "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config.cmake"
- "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config-version.cmake" - "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config-version.cmake"
- DESTINATION "${GEMMI_INSTALL_CMAKEDIR}") - DESTINATION "${GEMMI_INSTALL_CMAKEDIR}")
-elseif (BUILD_SHARED_LIBS AND BUILD_GEMMI_PROGRAM)
- install(TARGETS gemmi_cpp)
-endif()
+ #install(DIRECTORY include/gemmi DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}")
+ #install(TARGETS gemmi_headers gemmi_cpp EXPORT GemmiTargets)
+ #install(EXPORT GemmiTargets FILE gemmi-targets.cmake NAMESPACE gemmi:: + #install(EXPORT GemmiTargets FILE gemmi-targets.cmake NAMESPACE gemmi::
+ # DESTINATION "${GEMMI_INSTALL_CMAKEDIR}") + # DESTINATION "${GEMMI_INSTALL_CMAKEDIR}")
+ #install(FILES + #install(FILES
+ # "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config.cmake" + # "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config.cmake"
+ # "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config-version.cmake" + # "${CMAKE_CURRENT_BINARY_DIR}/gemmi-config-version.cmake"
+ # DESTINATION "${GEMMI_INSTALL_CMAKEDIR}") + # DESTINATION "${GEMMI_INSTALL_CMAKEDIR}")
+#elseif (BUILD_SHARED_LIBS AND BUILD_GEMMI_PROGRAM)
+# install(TARGETS gemmi_cpp)
+#endif()
if (USE_PYTHON) if (USE_PYTHON)
if (DEFINED PYTHON_INSTALL_DIR) if (DEFINED PYTHON_INSTALL_DIR)
@@ -444,8 +445,8 @@ if (USE_PYTHON)
# and don't respect CMAKE_INSTALL_PREFIX.
# https://discourse.cmake.org/t/findpython3-how-to-specify-local-installation-directory-for-python-module/3580/5
install(TARGETS gemmi_py DESTINATION "${Python_SITEARCH}")
- install(DIRECTORY examples/ DESTINATION "${Python_SITELIB}/gemmi-examples"
- FILES_MATCHING PATTERN "*.py")
+ #install(DIRECTORY examples/ DESTINATION "${Python_SITELIB}/gemmi-examples"
+ # FILES_MATCHING PATTERN "*.py")
if (INSTALL_EGG_INFO)
install(CODE
"execute_process(COMMAND \"${Python_EXECUTABLE}\" setup.py install_egg_info --install-dir \"\$ENV{DESTDIR}${Python_SITELIB}\"

5
science/py-gemmi/pkg-plist
View File

@ -1,6 +1 @@
%%PYTHON_SITELIBDIR%%/gemmi-%%VER%%-py%%PYTHON_VER%%.egg-info/PKG-INFO
%%PYTHON_SITELIBDIR%%/gemmi-%%VER%%-py%%PYTHON_VER%%.egg-info/SOURCES.txt
%%PYTHON_SITELIBDIR%%/gemmi-%%VER%%-py%%PYTHON_VER%%.egg-info/dependency_links.txt
%%PYTHON_SITELIBDIR%%/gemmi-%%VER%%-py%%PYTHON_VER%%.egg-info/not-zip-safe
%%PYTHON_SITELIBDIR%%/gemmi-%%VER%%-py%%PYTHON_VER%%.egg-info/top_level.txt
%%PYTHON_SITELIBDIR%%/gemmi%%PYTHON_EXT_SUFFIX%%.so %%PYTHON_SITELIBDIR%%/gemmi%%PYTHON_EXT_SUFFIX%%.so