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6130 Commits

Author SHA1 Message Date
Danilo Egea Gondolfo
170cb07fe4 math/armadillo: Update to 10.6.2 
Drop maintainership.
 2021-09-21 10:25:15 +01:00
Po-Chuan Hsieh
43198643e0 science/py-segregation: Update to 2.1.0 
Changes:	https://github.com/pysal/segregation/releases
 2021-09-21 11:44:55 +08:00
Po-Chuan Hsieh
0cbc87f551 science/py-pygeometa: Update to 0.8.0 
Changes:	https://github.com/geopython/pygeometa/releases
		https://github.com/geopython/pygeometa/blob/master/debian/changelog
 2021-09-21 11:44:55 +08:00
Po-Chuan Hsieh
6f119b46fa science/py-h5py: Update to 3.4.0 
Changes:	https://github.com/h5py/h5py/releases
		https://github.com/h5py/h5py/blob/master/docs/whatsnew/3.4.rst
		https://docs.h5py.org/en/stable/whatsnew/index.html
 2021-09-21 11:44:54 +08:00
Po-Chuan Hsieh
233ad9c646 science/py-esda: Add SHAPE option 2021-09-21 11:44:54 +08:00
Wen Heping
20438ba77d science/py-pydicom: Update to 2.2.1 2021-09-21 08:57:04 +08:00
Yuri Victorovich
1dcd34af41 science/cantera: Fix handling of Python versions 2021-09-19 20:08:25 -07:00
Yuri Victorovich
f628a6e453 science/cantera: Update 2.5.1-552 -> 2.5.1-611 
The PYTHON option is now fixed and is enabled.
 2021-09-19 19:53:43 -07:00
Po-Chuan Hsieh
509e356160 science/py-pysal: Update to 2.5.0 
Changes:	https://github.com/pysal/pysal/releases
 2021-09-19 14:00:21 +08:00
Yuri Victorovich
79be00646b science/axom: Add dependencies 2021-09-18 12:37:10 -07:00
Yuri Victorovich
f0257531e9 science/py-nilearn: Update 0.8.0 -> 0.8.1 
Reported by:	portscout
 2021-09-18 10:48:28 -07:00
TAKATSU Tomonari
34e9235dee science/R-cran-e1071: Update to 1.7-9 2021-09-18 13:18:14 +00:00
Yuri Victorovich
009e0a233d science/shelxle: Update 1.0.1306 -> 1.0.1320 2021-09-17 01:48:02 -07:00
Yuri Victorovich
7f4490149b science/conduit: Add dependencies 2021-09-16 12:48:34 -07:00
Yuri Victorovich
91e83b602b science/ascent: New port: Visualization and analysis runtime for multi-physics HPC simulations 2021-09-16 09:46:15 -07:00
Yuri Victorovich
c4942f9114 science/conduit: Add fortran interface; Turn on MPI. 
Both because consumers (like ascent) need it.
 2021-09-16 01:35:52 -07:00
Yuri Victorovich
4b586534a9 science/py-qcelemental: Update 0.21.0 -> 0.22.0 2021-09-14 02:21:06 -07:00
Yuri Victorovich
6eb990f406 science/agrum: Update 0.22.0 -> 0.22.1 2021-09-13 15:28:57 -07:00
Yuri Victorovich
ec95bfb566 science/py-scikit-sparse: Update 0.4.5 -> 0.4.6 
Reported by:	portscout
 2021-09-13 15:28:57 -07:00
Yuri Victorovich
fe77478798 science/yoda: Update 1.9.0 -> 1.9.1 
Now the python binding builds fine.
The project also installs the completion file by itself.
 2021-09-12 10:27:25 -07:00
Yuri Victorovich
66f0d417dc science/helfem: Update g20210807 -> g20210912 
Shared libraries now work.
 2021-09-12 10:27:23 -07:00
Fernando Apesteguía
71ac81015e science/afni: update to 21.2.06 
* Remove openmp support. We don't seem to need it.
 * Adjust patch
 * Add -fcommon to make it build in 13 and 14-current
 * Add patch to include -DPIC -fPIC in i386. Otherwise we get:

ld: error: can't create dynamic relocation R_386_32 against symbol: .L.str.13 in
readonly segment
 2021-09-12 15:58:20 +02:00
Yuri Victorovich
c9f9c0d71b science/cantera: Add missing boost dependency 
Reported by:	fallout
 2021-09-11 20:10:09 -07:00
Yuri Victorovich
94d91d8361 science/helfem: New port: Finite element methods for electronic structure calculations 2021-09-11 02:24:45 -07:00
Yuri Victorovich
dfc0238640 science/py-pyked: New port: Package for manipulating Chemical Kinetics Experimental Data files 2021-09-11 00:13:16 -07:00
Yuri Victorovich
c43e8a0f4b science/cantera: Small corrections 2021-09-10 12:03:36 -07:00
Yuri Victorovich
af1b8fdf83 science/cantera: New port: Chemical kinetics, thermodynamics, and transport tool suite 2021-09-10 11:50:08 -07:00
Yuri Victorovich
8eb9c3421e science/coordgenlibs: Update 2.0.3 -> 3.0.0 2021-09-09 13:00:09 -07:00
Yuri Victorovich
bb854369b1 science/tinker: Update 8.9.3 -> 8.9.4 
Reported by:	tinker
 2021-09-07 11:22:02 -07:00
Rene Ladan
3f85df4925 *: Return culot@'s ports to the pool (and perl@) after safekeeping his bit. 2021-09-06 23:13:27 +02:00
Yuri Victorovich
beaaca58c7 science/jmol: Update 14.31.52 -> 14.31.53 
Reported by:	portscout
 2021-09-06 01:34:51 -07:00
Yuri Victorovich
511d2ff09d science/openmx: Cleanup - remove unnecessary lines 
Reported by:	gerald
 2021-09-05 10:00:44 -07:00
Gerald Pfeifer
5e376f043a science/openmx: Remove $FreeBSD$ 
When this port was resurrected the $FreeBSD$ marker was resurrected,
too, while we globally had abandoned it in the meantime.
 2021-09-05 13:58:10 +00:00
Tobias Kortkamp
310623bb97 *: Clean up some things 
- Fix typos
- Remove duplicate variables
- Remove nop or unreferenced variables
- Add missing ports to the build
- Clean up commented PORTREVISION
- Add missing USES

Reported by:	portscan
 2021-09-03 15:01:58 +02:00
Adam Weinberger
58f45200bc many: Depend on vim instead of vim-console 2021-09-02 12:09:29 -06:00
Tobias C. Berner
6f5850a014 KDE: Update KDE Gear to 21.08.1 
Thursday, 2 September 2021

Over 120 individual programs plus dozens of programmer libraries and
feature plugins are released simultaneously as part of KDE Gear.

Today they all get new bugfix source releases with updated translations,
including:

  *  konsole: Fix KXmlGUI toolbars and Konsole MainWindow size.
  *  elisa: Fix the “Files” view.
  *  skanlite: Fix image saving when preview is not shown.

Full announcement:
	https://kde.org/announcements/gear/21.08.1/

Full Changelog:
	https://kde.org/announcements/changelogs/gear/21.08.1/
 2021-09-02 16:52:51 +02:00
Alexey Dokuchaev
e9148ce045 Cleanup: for ports under s* categories, drop redundant GH_* knobs. 2021-09-01 11:46:24 +00:00
Bernhard Froehlich
dec69ccb4f science/py-scipy: Add CPE information 
Approved by:    portmgr (blanket)
 2021-08-31 09:23:26 +00:00
Yuri Victorovich
d518ae499e science/py-pymatgen: Update 2022.0.11 -> 2022.0.12 
Reported by:	portscout
 2021-08-26 10:45:42 -07:00
Yuri Victorovich
e26fa0fcc3 science/shelxle: Update 1.0.1302 -> 1.0.1306 
Reported by:	portscout
 2021-08-26 01:36:56 -07:00
Yuri Victorovich
2a1c25af1a science/rdkit: Update 2021.03.4 -> 2021.03.5 2021-08-25 22:38:54 -07:00
Yuri Victorovich
7890177363 science/siconos: Add test target (currently broken) 2021-08-25 13:28:24 -07:00
Yuri Victorovich
5c2e32c94f science/siconos: Update 4.4.0.rc3 -> 4.4.0.rc4 2021-08-25 13:28:23 -07:00
Gerald Pfeifer
fb954a17f8 science/dynare: Replace USE_GCC=any with USE_GCC=yes 
Since commit 96c17633d9 in May 2021
USE_GCC=any is just an old (and odd) way of writing USE_GCC=yes and
was deprecated even before. Replace it with USE_GCC=yes.

(Ideally USE_GCC was not necessary at all; ports should be converted
away from it.)
 2021-08-23 20:11:21 +00:00
Yuri Victorovich
8fc23f5e73 science/hypre: Update 2.22.0 -> 2.22.1 
Reported by:	portscout
 2021-08-21 10:12:16 -07:00
Yuri Victorovich
3be697435f science/qbox: 1.73.2 -> 1.73.3 
Reported by:	portscout
 2021-08-20 22:56:24 -07:00
Yuri Victorovich
c63158593b science/dynare: Improve pkg-message 2021-08-20 02:08:47 -07:00
Yuri Victorovich
924a1e1b6f science/siconos: Correct the BROKENxx line 2021-08-19 12:30:09 -07:00
Yuri Victorovich
4765541a9e science/jmol: Update 14.31.51 -> 14.31.52 
Reported by:	portscout
 2021-08-19 11:04:44 -07:00
Yuri Victorovich
f1a67e3563 science/gromacs: Update 2021.2 -> 2021.3 
Reported by:	portscout
 2021-08-19 11:04:44 -07:00