Älven
db5709d2a0
science/mctc-lib: Update 0.4.0 => 0.5.0
...
Changelogs:
* https://github.com/grimme-lab/mctc-lib/releases/tag/v0.4.1
* https://github.com/grimme-lab/mctc-lib/releases/tag/v0.4.2
* https://github.com/grimme-lab/mctc-lib/releases/tag/v0.5.0
* https://github.com/grimme-lab/mctc-lib/compare/v0.4.0...v0.4.1
* https://github.com/grimme-lab/mctc-lib/compare/v0.4.1...v0.4.2
* https://github.com/grimme-lab/mctc-lib/compare/v0.4.2...v0.5.0
* Add WWW for source code repository
* Pet portclippy(1) and portfmt(1)
Approved by: yuri@ (maintainer, Mentor)
Differential Revision: https://reviews.freebsd.org/D53524
2025-11-02 14:51:56 +04:00
Älven
a11a29b056
science/tblite: Update 0.4.0 => 0.5.0
...
Changelogs:
* https://github.com/tblite/tblite/releases/tag/v0.5.0
* https://github.com/tblite/tblite/compare/v0.4.0...v0.5.0
* Add WWW for main site
* Clarify LICENSE
Approved by: yuri@ (maintainer, Mentor)
Differential Revision: https://reviews.freebsd.org/D53523
2025-11-02 14:46:12 +04:00
Yuri Victorovich
0b8050edaf
science/arbor: update 0.10.1 → 0.11.0
2025-11-02 02:11:48 -08:00
Antoine Brodin
5375237040
misc: unbreak the ports tree
2025-11-01 21:07:05 +00:00
Matthias Andree
1403bb7765
*: Revise USES=python:... version range constraints
...
and strip all lower bounds of 3.9 or 3.10 because they are implied now.
python:3.9-X -> python:-X
python:3.9+ -> python
python:3.10-X -> python:-X
python:3.10+ -> python
(options such as ,build preserved)
2025-11-01 18:23:22 +01:00
Paavo-Einari Kaipila
4ca2e85b7d
science/seacas: Update to 2025-10-14
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Fixes build with fmt 12+
Changelogs:
https://github.com/sandialabs/seacas/releases/tag/v2025-10-14
https://github.com/sandialabs/seacas/releases/tag/v2025-08-28
https://github.com/sandialabs/seacas/releases/tag/v2025-08-19
https://github.com/sandialabs/seacas/releases/tag/v2025-07-07
https://github.com/sandialabs/seacas/releases/tag/v2025-06-27
https://github.com/sandialabs/seacas/releases/tag/v2025-06-07
https://github.com/sandialabs/seacas/releases/tag/v2025-05-22
https://github.com/sandialabs/seacas/releases/tag/v2025-05-05
https://github.com/sandialabs/seacas/releases/tag/v2025-04-29
https://github.com/sandialabs/seacas/releases/tag/v2025-04-14
PR: 290162
Approved by: maintainer timeout, 2+ weeks
2025-11-01 17:40:44 +01:00
Muhammad Moinur Rahman
691a01ea20
science/py-netCDF4: Return to pool
2025-11-01 12:24:14 +01:00
Yuri Victorovich
cd69fb8348
science/mopac: update 23.1.2 → 23.2.2
...
Reported by: portscout
2025-10-31 02:05:28 -07:00
Yuri Victorovich
a09e953a1d
science/polytope: Change comment
2025-10-30 23:45:06 -07:00
Yuri Victorovich
9d82cacf3c
math/mfem: update 4.7 → 4.8
2025-10-30 23:45:06 -07:00
Yuri Victorovich
160a45c503
science/rdkit: update 2025_03_1 → 2025.09.1
2025-10-30 22:25:43 -07:00
Yuri Victorovich
11b4b433c2
science/spheral: update 2024.06.1 → 2025.06.1
2025-10-30 15:51:18 -07:00
Yuri Victorovich
9ed6e0e0e6
science/polytope: update 0.7.3 → 0.7.3-18
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Use current commit because now cmake files are installed that are needed for dependencies.
2025-10-30 15:51:18 -07:00
Michael Osipov
954ab31f55
science/py-scikit-learn: Upgrade port to 1.7.2
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PR: 290649
Approved by: wen (maintainer)
Differential Revision: https://reviews.freebsd.org/D53432
Release Notes: https://scikit-learn.org/stable/whats_new/v1.7.html#release-notes-1-7
2025-10-30 22:36:05 +01:00
Yuri Victorovich
aafc26e2f6
science/py-qcelemental: update 0.28.0 → 0.29.0
2025-10-30 00:49:43 -07:00
Yuri Victorovich
bd8e295f68
science/py-nglview: update 3.1.2 → 4.0
2025-10-30 00:49:43 -07:00
Yuri Victorovich
eeaaec2088
science/py-neo: update 0.14.2 → 0.14.3
2025-10-30 00:11:24 -07:00
Yuri Victorovich
91d31e9fa6
science/py-periodictable: update 1.7.1 → 2.0.2
2025-10-30 00:11:24 -07:00
Yuri Victorovich
08da2fd547
science/py-chempy: update 0.9.0 → 0.10.1
2025-10-30 00:11:24 -07:00
Max Brazhnikov
5195754ac2
KDE: Update KDE Gear to 25.08.2
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Announcement: https://kde.org/announcements/gear/25.08.2/
Ports changes:
security/keysmith:
- Refresh KDE/Qt dependencies
sysutils/kpmcore:
- Pass maintainership to kde@
- Refresh dependencies
2025-10-29 22:01:19 +03:00
Jason W. Bacon
7448f577d8
science/csvtk: Update to 0.35.0
...
A few fixes and enhancements
Changes: https://github.com/shenwei356/csvtk/releases
Note: Required for make test in biology/unikmer, but this was already
failing with csvtk 0.34.0.
Reported by: portscout
2025-10-29 08:51:06 -05:00
John Hein
1822a3d8a5
science/py-scikit-sparse: Fix incorrect distinfo
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PR: 286525
Tested by: michaelo
Approved by: yuri (maintainer timeout)
MFH: 2025Q4
2025-10-29 08:30:00 +01:00
Yuri Victorovich
bba9a1c757
science/py-veusz: update 3.6.2 → 4.2
2025-10-28 20:42:25 -07:00
Yuri Victorovich
a976366ad1
science/py-hiphive: Move to py-hiPhive; update 1.2 → 1.5
2025-10-28 20:42:25 -07:00
Yuri Victorovich
3927f14a23
science/py-icet: update 3.1 → 3.2
2025-10-28 20:42:25 -07:00
Yuri Victorovich
8bb25afd18
science/py-vedo: update 2024.5.3 → 2025.5.4
2025-10-28 20:42:25 -07:00
Jason W. Bacon
0bbd21d199
science/orthanc-postgresql: Update to 9.0
...
Take maintainership:
Maintainer unresponsive for almost two years:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=275625
Also unresponsive to more recent pings
Changes: https://orthanc.uclouvain.be/hg/orthanc-postgresql/
PR: 275624
Approved by: portmgr (blanket, unbreak)
2025-10-27 12:10:26 -05:00
Jason W. Bacon
1e51eaa382
science/orthanc-mysql: Update to 5.2
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Take maintainership:
Maintainer unrepsonsive for almost two years:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=275625
Also unresponsive to more recent pings
PR: 275623
2025-10-27 12:04:01 -05:00
Jason W. Bacon
a61fa75a17
science/orthanc-dicomweb: Update to 1.21
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Take maintainership:
Maintainer unrepsonsive for almost two years:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=275625
Also unresponsive to more recent pings
Changes: https://orthanc.uclouvain.be/hg/orthanc-dicomweb/
PR: 275622
2025-10-27 11:56:51 -05:00
Jason W. Bacon
36875cd4c2
science/orthanc-webviewer: Update to 2.10
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Take maintainership:
Maintainer unrepsonsive for almost two years:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=275625
Also unresponsive to more recent pings
Changes: https://orthanc.uclouvain.be/hg/orthanc-webviewer/
2025-10-27 11:47:08 -05:00
Po-Chuan Hsieh
ae37162352
science/py-h5py: Update to 3.15.1
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Changes: https://github.com/h5py/h5py/releases
https://github.com/h5py/h5py/tree/master/docs/whatsnew
https://docs.h5py.org/en/stable/whatsnew/
2025-10-27 23:33:31 +08:00
Jason W. Bacon
4b787786f9
science/orthanc: Take maintainership
...
Maintainer unrepsonsive for almost two years:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=275625
Also unresponsive to more recent pings
2025-10-27 08:36:33 -05:00
Jason W. Bacon
d2dff49036
science/orthanc: Update to 1.12.9 and unbreak
...
Fix service start based on:
https://orthanc.uclouvain.be/bugs/show_bug.cgi?id=227
Improve RC script to allow user flags
Fix mismatched db paths
Release notes:
https://orthanc.uclouvain.be/hg/orthanc/file/Orthanc-1.12.9/NEWS
PR: 290458 275624 275623 275622
Approved by: portmgr (blanket, unbreak)
2025-10-24 19:50:01 -05:00
Dima Panov
67fb95fb3b
devel/boost: bump consumers after boost upgrade (+)
...
Get rid of direct dependency ob libbost_system.so, use libboost_thread.so instead
2025-10-20 14:48:39 +03:00
Thierry Thomas
140b3b8510
science/v_sim: upgrade to 3.9.0
...
Release notes at https://gitlab.com/l_sim/v_sim/-/releases
2025-10-20 12:13:48 +02:00
Po-Chuan Hsieh
d58684cc6d
science/py-cfgrib: Update to 0.9.15.1
...
Changes: https://github.com/ecmwf/cfgrib/releases
https://github.com/ecmwf/cfgrib/blob/master/CHANGELOG.rst
2025-10-19 07:53:52 +08:00
Po-Chuan Hsieh
673bfb8395
science/py-eccodes: Update to 2.44.0
...
Changes: https://github.com/ecmwf/eccodes-python/releases
https://github.com/ecmwf/eccodes-python/blob/develop/CHANGELOG.rst
2025-10-19 07:51:23 +08:00
Po-Chuan Hsieh
5ba68814e3
science/eccodes: Update to 2.44.0
...
Changes: https://confluence.ecmwf.int/display/ECC/Latest+news
2025-10-19 07:51:20 +08:00
Yuri Victorovich
6226785359
science/conduit: update 0.9.3 → 0.9.5
2025-10-18 11:26:14 -07:00
Yuri Victorovich
3751874d4f
science/ascent: update 0.9.3 → 0.9.5
2025-10-18 11:04:15 -07:00
Yuri Victorovich
449ccce5a9
science/py-abipy: Update WWW
2025-10-18 02:18:25 -07:00
TAKATSU Tomonari
f77585acea
science/R-cran-Epi: Update to 2.61
...
Reported by: portscout
2025-10-17 17:14:19 +00:00
Yuri Victorovich
378964a1b0
science/py-fresnel: update 0.13.4-4 → 0.13.8
2025-10-17 08:58:48 -07:00
Max Brazhnikov
f67e776f23
science/py-openpiv: update to 0.25.3
...
- Update to the latest release and convert to pep517
- Switch to PYPI distribution
- Update WWW
- Remove OPTIONS, all extra dependencies are now mandatory
2025-10-17 12:38:43 +03:00
Yuri Victorovich
5f68c82753
science/py-pymatgen: update 2025.6.14 → 2025.10.7
2025-10-17 01:01:42 -07:00
Yuri Victorovich
e356fa3d91
science/rdkit: Broken on 16/amd64
...
Reported by: fallout
2025-10-17 01:01:37 -07:00
Yuri Victorovich
bd4ffa5d02
science/sirius: Broken on 16
2025-10-17 01:01:36 -07:00
Yuri Victorovich
b2599bac81
science/py-corner: New port: Make some beautiful corner plots
2025-10-16 16:14:59 -07:00
Dirk Meyer
377ac07f9f
graphics/graphviz: update to 14.0.1
2025-10-16 22:13:36 +02:00
Gleb Popov
79e371a333
science/mdynamix: Fix building with Flang
2025-10-15 17:03:13 +03:00
