Commit Graph

15609 Commits

Author SHA1 Message Date
Sunpoet Po-Chuan Hsieh 1a372c7d9f Update to 0.1.76
Changes:	https://github.com/google/jax/blob/master/docs/CHANGELOG.rst
2020-09-09 20:38:37 +00:00
Mark Linimon 7eafa6e1eb Add compiler:c++11-lang to USES to fix build on GCC-based systems:
CMake Error in CMakeLists.txt:
  Target "pdal_io_numpy_test" requires the language dialect "CXX11" , but
  CMake does not know the compile flags to use to enable it.

Approved by:	portmgr (tier-2 blanket)
2020-09-09 14:17:07 +00:00
TAKATSU Tomonari 51c8b8f40b - Update to 5.65 2020-09-09 09:02:11 +00:00
Stephen Montgomery-Smith 6abb573398 - Depreciate, because this legacy port is no longer required by
math/octave.

Submitted by:	cfyecrayz@liamekaens.com
Reported by:	249182
2020-09-08 18:48:14 +00:00
Stephen Montgomery-Smith bafe857183 - Use math/qhull instead of math/qhull5.
- Bump portrevision.

PR:		249182
Submitted by:	jcfyecrayz@liamekaens.com
2020-09-08 18:07:41 +00:00
Sunpoet Po-Chuan Hsieh 31cfa4c991 Update to 0.2.1
Changes:	https://github.com/google/flax/releases
		https://github.com/google/flax/blob/master/CHANGELOG.md
2020-09-08 17:49:05 +00:00
Yuri Victorovich dfba9ee80f math/blasfeo: Update 0.1.1 -> 0.1.2
Reported by:	portscout
2020-09-08 05:11:26 +00:00
Yuri Victorovich 0627fbc341 math/ensmallen: Update 2.14.1 -> 2.14.2
Reported by:	portscout
2020-09-08 03:06:47 +00:00
Tobias Kortkamp d4c2e1c82a devel/libfmt: Update to 7.0.3
Changes:	https://github.com/fmtlib/fmt/releases/tag/7.0.3
ABI:		https://abi-laboratory.pro/tracker/timeline/fmt
2020-09-07 21:19:41 +00:00
Sunpoet Po-Chuan Hsieh 3fac2636bf Update to 1.12
Changes:	https://metacpan.org/changes/distribution/Math-MPC
2020-09-07 18:12:29 +00:00
TAKATSU Tomonari dc8693c996 - Update to 2.1-2 2020-09-07 09:03:41 +00:00
Yuri Victorovich 81272ea0d3 math/elemental: Update 0.87.7 -> 1.4.0
The LLNL account is am actively developed fork.
2020-09-07 06:24:40 +00:00
Mark Linimon 07ea08f121 Fix build on powerpc64 by extending the clauses by which ARCH_K8 is
*not* defined.

This should be upstreamed.

Approved by:	portmgr (tier-2 blanket)
2020-09-06 18:40:36 +00:00
Piotr Kubaj e9f8ea17dd math/openblas: add missing library to pkg-plist
lib/libopenblas.so.0 was forgotten in my previous commit.
2020-09-06 18:28:35 +00:00
Piotr Kubaj 0d0eb2d192 math/flann: fix build on GCC architectures
Last addition to files/patch-src_cpp_CMakeLists.txt breaks build.

Also require newer GCC.

PR:		249152
Approved by:	yuri (maintainer)
2020-09-06 17:59:16 +00:00
Piotr Kubaj a2fe46eed4 math/openblas: update to 0.3.10, add POWER8 option
Changelog:

common:

    Improved thread locking behaviour in blas_server and parallel getrf
    Imported bugfix 394 from LAPACK (spurious reference to "XERBL"
    due to overlong lines)
    Imported bugfix 403 from LAPACK (compile option "recursive" required
    for correctness with Intel and PGI)
    Imported bugfix 408 from LAPACK (wrong scaling in ZHEEQUB)
    Imported bugfix 411 from LAPACK (infinite loop in LARGV/LARTG/LARTGP)
    Fixed mismatches between BUFFERSIZE and GEMM_UNROLL parameters that
    could lead to crashes at large matrix sizes
    Restored internal soname in dynamic libraries on FreeBSD and Dragonfly
    Added API (openblas_setaffinity) to set thread affinity
    programmatically on Linux
    Added initial infrastructure for half-precision floating point
    (bfloat16) support with a generic implementation of SHGEMM
    Added CMAKE build system support for building the cblas_Xgemm3m
    functions
    Fixed CMAKE support for building in a path with embedded spaces
    Fixed CMAKE (non)handling of NO_EXPRECISION and MAX_STACK_ALLOC
    Fixed GCC version detection in the Makefiles
    Allowed overriding the names of AR, AS and LD in Makefile builds

POWER:

    fixed big-endian POWER8 ELFv2 builds on FreeBSD
    Fixed GCC version checks and DYNAMIC_ARCH builds on POWER9
    Fixed CMAKE build support for POWER9
    fixed a potential race condition in the thread buffer allocation
    Worked around LAPACK test failures on PPC G4

MIPS:

    fixed a potential race condition in the thread buffer allocation
    Added support for MIPS 24K/24KE family based on P5600 kernels

MIPS64:

    fixed a potential race condition in the thread buffer allocation
    Added TARGET=GENERIC

ARMV7:

    fixed a race condition in the thread buffer allocation

ARMV8:

    Fixed a race condition in the thread buffer allocation
    Fixed zero initialisation in the assembly for SGEMM and DGEMM BETA
    Improved performance of the ThunderX2 DAXPY kernel
    Added an optimized SGEMM kernel for Cortex A53
    Fixed Makefile support for INTERFACE64 (8-byte integer)

x86_64:

    Fixed a syntax error in the CMAKE setup for SkylakeX
    Improved performance of STRSM on Haswell, SkylakeX and Ryzen
    Improved SGEMM performance on SGEMM for workloads with ldc a
    multiple of 1024
    Improved DGEMM performance on Skylake X
    Fixed unwanted AVX512-dependency of SGEMM in DYNAMIC_ARCH
    builds created on SkylakeX
    Removed data alignment requirement in the SSE2 copy kernels
    that could cause spurious crashes
    Added a workaround for an optimizer bug in AppleClang 11.0.3
    Fixed LAPACK-TEST failures with Intel Fortran
    Fixed compilation and LAPACK test results with recent Flang
    and AMD AOCC
    Fixed DYNAMIC_ARCH builds with CMAKE on OS X
    Fixed missing exports of cblas_i?amin, cblas_i?min, cblas_i?max,
    cblas_?sum, cblas_?gemm3m in the shared library on OS X
    Fixed reporting of cpu name in DYNAMIC_ARCH builds (would sometimes
    show the name of an older generation chip supported by the same kernels)

IBM Z:

    Improved performance of SGEMM/STRMM and DGEMM/DTRMM on Z14

PR:		249120
Approved by:	phd_kimberlite@yahoo.co.jp (maintainer)
2020-09-06 17:52:25 +00:00
Sunpoet Po-Chuan Hsieh cf8d626624 Convert REINPLACE_CMD to patch file 2020-09-06 15:40:00 +00:00
Yuri Victorovich 77c1e33134 math/py-simhash: Update 1.10.2 -> 1.11.0 2020-09-06 14:48:56 +00:00
Yuri Victorovich 54e51de1d3 math/py-grandalf: Update 0.6 -> 0.7 2020-09-06 14:47:25 +00:00
Yuri Victorovich cfa9144ba2 math/py-chaospy: 3.3.7 -> 4.0.0 2020-09-06 14:36:33 +00:00
Yuri Victorovich 40e1b9953e math/casadi: Update 3.5.4 -> 3.5.5 2020-09-06 07:22:58 +00:00
Yuri Victorovich 14c260770f math/ensmallen: Update 2.13.0 -> 2.14.1 2020-09-06 00:06:14 +00:00
Sunpoet Po-Chuan Hsieh 58dbe379ae Update version requirement of RUN_DEPENDS 2020-09-05 21:32:51 +00:00
Sunpoet Po-Chuan Hsieh c61a71b2b8 Update version requirement of RUN_DEPENDS 2020-09-05 21:32:47 +00:00
Sunpoet Po-Chuan Hsieh 517b5e1139 Update version requirement of RUN_DEPENDS 2020-09-05 21:32:42 +00:00
Sunpoet Po-Chuan Hsieh 3abec33c3f Remove SKOPT option 2020-09-05 21:32:38 +00:00
Johannes M Dieterich fadf0af3c4 math/sleef: update to 3.5.0
With this, remove fcommon workaround and patch.
2020-09-05 20:09:32 +00:00
Yuri Victorovich acfd6909d8 math/singular: Update 4.1.3 -> 4-1-3p2 2020-09-05 17:57:38 +00:00
Yuri Victorovich f018040a0f math/onednn: Update 1.6.1 -> 1.6.2
Reported by:	portscout
2020-09-05 16:41:39 +00:00
Yuri Victorovich d809eee36b math/casadi: Update 3.5.3 -> 3.5.4
Reported by:	portscout
2020-09-05 05:34:13 +00:00
TAKATSU Tomonari ef42a4a062 - Update to 0.9.900.3.0 2020-09-04 22:38:00 +00:00
Rene Ladan 7ea45c6f99 math/py-yt: remove optional non-default support for expired graphics/py-pyembree 2020-09-04 19:24:54 +00:00
Piotr Kubaj 0d96105e77 math/pdal: use libunwind only on aarch64, amd64 and i386
pdal builds otherwise without any patches on powerpc64.
2020-09-04 16:22:55 +00:00
Tobias C. Berner a2cb94c52a Update KDE Applications (release-service) to 20.08.1 2020-09-03 14:48:14 +00:00
Stefan Eßer 51197d9b0d Fix build with -fno-common 2020-09-03 12:05:26 +00:00
Yuri Victorovich 45799a0943 math/mlpack: Update 3.3.2 -> 3.4.0
Reported by:	portscout
2020-09-03 08:04:48 +00:00
Loïc Bartoletti e46da1526d math/py-pdal: Update to 2.3.4 2020-09-02 12:13:17 +00:00
Baptiste Daroussin 2e1980e0c6 Fix build with -fno-common (a similar patch exist already upstream) 2020-09-02 08:11:57 +00:00
Yuri Victorovich f522970ecf math/faiss: Permit build on all architectures expecting it to properly link with OpenBLAS libraries, whether DYNAMIC_ARCH is set or not
Reported by:	pkubaj
2020-08-31 18:07:12 +00:00
Yuri Victorovich ae9ca27fa5 math/faiss: Add ONLY_FOR_ARCHS
Reported by:	linimon
2020-08-31 16:09:03 +00:00
Yuri Victorovich e99981f699 math/universal: Update g20200829 -> g20200831 2020-08-31 15:59:08 +00:00
Gleb Popov b842a879db math/hs-Agda: Mark BROKEN on i386. There is a hope that the sutiation will improve
in new GHC releases.
2020-08-31 10:58:30 +00:00
Yuri Victorovich 50340f5192 New port: math/faiss: Library for efficient similarity search & clustering of dense vectors 2020-08-31 01:18:05 +00:00
Kyle Evans efde936cf4 math/reduce: fix the build with LLVM 11
reduce started to fail with the default switch to -fno-common in LLVM 11
(and GCC 10). This patch was written then confirmed to be the fix that
upstream also provided in late March.

MFH:		2020Q3 (-fno-common build fix)
2020-08-30 21:06:10 +00:00
Sunpoet Po-Chuan Hsieh b94e8d8c27 Bump PORTREVISION for devel/protobuf shlib change 2020-08-30 20:19:41 +00:00
Sunpoet Po-Chuan Hsieh fb68b6f658 Update to 0.12.0
Changes:	https://github.com/statsmodels/statsmodels/releases
		https://www.statsmodels.org/stable/release/index.html
2020-08-30 07:15:41 +00:00
Fernando Apesteguía 840978d42e math/saga: Update to 7.7.0
ChangeLog: https://sourceforge.net/p/saga-gis/wiki/Changelog%207.7.0/attachment/changelog_saga_7.7.0.txt

PR:	248949
Submitted by:	rhurlin@gwdg.de (maintainer)
2020-08-29 16:56:00 +00:00
Yuri Victorovich 6e2ab1603b New port: math/universal: Header-only C++ template library for universal number arithmetic 2020-08-29 16:10:03 +00:00
Tobias C. Berner ed08a98b14 math/dieharder: fix build on recent current 2020-08-28 18:56:30 +00:00
Yuri Victorovich 4d7451a165 math/flann: Update 1.9.1-19 -> 1.9.1-29 2020-08-28 17:49:50 +00:00