Spatial Interaction Modeling Package
The Spatial Interaction Modeling (SpInt) module seeks to provide a collection of
tools to study spatial interaction processes and analyze spatial interaction
data.
The module currently supports the calibration of the 'family' of spatial
interaction models (Wilson, 1971) which are derived using an entropy maximizing
(EM) framework or the equivalent information minimizing (IM) framework. As such,
it is able to derive parameters for the following Poisson count models:
- unconstrained gravity model
- production-constrained model (origin-constrained)
- attraction-constrained model (destination-constrained)
- doubly-constrained model
WWW: https://github.com/pysal/spint
This module is an adaptation of a portion of GLM functionality from the
Statsmodels package, this it has been simplified and customized for the purposes
of serving as the base for several other PySAL modules, namely SpInt and GWR.
Currently, it supports the estimation of Gaussian, Poisson, and Logistic
regression using only iteratively weighted least squares estimation (IWLS). One
of the large differences this module and the functions avaialble in the
Statsmodels package is that the custom IWLS routine is fully sparse compatible,
which was necesary for the very sparse design matrices that arise in constrained
spatial interaction models. The somewhat limited functionality and computation
of only a subset of GLM diagnostics also decreases the computational overhead.
Another difference is that this module also supports the estimation of
QuasiPoisson models. One caveat is that this custom IWLS routine currently
generates estimates by directly solves the least squares normal equations rather
than using a more robust method like the pseudo inverse. For more robust
estimation of ill conditioned data and a fuller GLM framework we suggest using
the original GLM functionality from Statsmodels.
WWW: https://github.com/pysal/spglm
Upstream announce: https://xfce.org/about/news/?post=1608595200
This XFCE release dropped support for GTK2 plugins and also dropped
GTK2 from all components.
WARNING: please check UPDATING before upgrading your packages. In
case of problems also read the libexo pkg-message.
Due to this some panel plugins and libraries will be removed since
they cannot compile anymore:
- print/xfce4-print
- x11/xfce4-quicklauncher-plugin
- x11/xfce4-wmdock-plugin
- x11-toolkits/libxfce4gui
These further components also fail to build or work and are being
marked BROKEN, deprecated and marked for removal:
- science/xfce4-equake-plugin
- x11/xfce4-embed-plugin
- deskutils/orage
- deskutils/xfce4-volumed [1]
deskutils/xfce4-notes-plugin will be also marked BROKEN, but there
is active development in it's upstream repository and a fixed release
is expected soon.
deskutils/xfce4-generic-slider will also be marked broken, since
it fails to compile. [2]
Thanks also to riggs, Olivier Duchateau <duchateau.olivier@gmail.com>
and the people in Approved and Reviewed lines below for help and
contributions.
Reviewed by: woodsb02
Approved by: sergey.dyatko@gmail.com (maintainer) [1],
ehaupt [2]
Differential Revision: https://reviews.freebsd.org/D27846
CMake Error at CMakeLists.txt:18 (include):
include could not find load file:
/usr/local/lib/petsc/conf/PETScBuildInternal.cmake
Reported by: pkg-fallout
Optuna is an automatic hyperparameter optimization software framework,
particularly designed for machine learning. It features an imperative,
define-by-run style user API. Thanks to our define-by-run API, the code
written with Optuna enjoys high modularity, and the user of Optuna can
dynamically construct the search spaces for the hyperparameters.
WWW: https://optuna.org/
PR: 252151
Submitted by: Neel Chauhan <neel@neelc.org>
Exceptions are:
- mail/mailman, our listservers still use it
- www/chromium, solely because of popular demand,
upstream is (slowly) working on porting it to Python 3
- ports that have actual patches for Python 3 against
them (Cinnamon and a few unrelated other ports)
- llvm70 and qt5-webengine because they seem to have a lot
of dependencies which need further analysis
- sysutils/uefi-edk2-bhyve because bhyve seems to use them
- python2 and python27 themselves
I'm sure there will be complaints, but the nice thing about
a version control system is that we can revert and adjust things.
2020-12-31 audio/ardour: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 audio/mixxx21: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 audio/xmms2: Uses Python 2.7 which is EOLed upstream
2020-12-31 chinese/sunpinyin: Uses Python 2.7 which is EOLed upstream
2020-12-31 databases/arangodb32: Uses Python 2.7 which is EOLed upstream
2020-12-31 databases/arangodb33: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/bzr: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/chromium-gn: Uses deprecated version of python, use devel/gn instead
2020-12-31 devel/electron4: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/electron5: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/electron6: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/electron7: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/gnatpython: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/godot2: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 devel/godot2-tools: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 devel/libhid: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/libosmocore: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/llvm60: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/mongo-cxx-driver: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-06-30 devel/p5-Log-Any-Adapter-Callback: Use devel/p5-Log-Any (Log::Any::Adapter::Capture) instead
2020-12-31 devel/py-backports.functools_lru_cache: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-backports.os: Python 2 is EOL upstream
2020-12-31 devel/py-backports.shutil_get_terminal_size: Python 2 is EOL upstream
2020-12-31 devel/py-backports_abc: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-cheetah: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-dis3: Python 2 only, backport of Python 3
2020-12-31 devel/py-enum34: Will be removed along with python27
2020-12-31 devel/py-functools32: Python 2 only, backport of Python 3
2020-12-31 devel/py-futures: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-more-itertools5: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-pathlib: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-selectors2: Python 2 is EOL upstream
2020-12-31 devel/py-should_dsl: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-singledispatch: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-subprocess32: Python 2 only, following EOL of lang/python27
2020-12-31 devel/py-total-ordering: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/py-typing: Python 2 only, backport of Python 3
2020-12-31 devel/py-weakrefmethod: Python 2 only, backport of Python 3
2020-12-31 devel/rbtools: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/subversion-lts: Uses Python 2.7 which is EOLed upstream
2020-12-31 devel/viewvc: Uses Python 2.7 which is EOLed upstream
2020-12-31 dns/py-dns: Uses Python 2.7 which is EOLed upstream
2020-12-31 editors/atom: Uses Python 2.7 which is EOLed upstream
2020-12-31 emulators/fceux: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 emulators/gem5: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 emulators/nonpareil: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/0ad: Uses deprecated version of python
2020-12-31 games/dangerdeep: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/freera: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/glob2: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/marsnomercy: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/netpanzer: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/pingus: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 games/renpy: Uses deprecated version of python
2020-12-31 graphics/goxel: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 graphics/py-pillow6: Uses Python 2.7 which is EOLed upstream
2020-12-31 graphics/sk1libs: Uses Python 2.7 which is EOLed upstream
2020-12-31 graphics/uniconvertor: Uses deprecated version of python
2020-12-31 lang/julia10: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/pypy: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/pypy3: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/spidermonkey185: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/spidermonkey24: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/spidermonkey52: Uses Python 2.7 which is EOLed upstream
2020-12-31 lang/spidermonkey60: Requires python2 to build
2020-12-31 lang/tolua++: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 mail/getmail: Uses deprecated version of python
2020-12-31 math/gringo: Uses Python 2.7 which is EOLed upstream
2020-12-31 multimedia/ffmpeg2theora: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 multimedia/mimms: Uses Python 2.7 which is EOLed upstream
2020-12-31 net/py-ipaddress: Uses Python 2.7 which is EOLed upstream
2020-12-31 net-p2p/linuxdcpp: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 security/broccoli: Depends lang/python27 which is EOLed upstream
2020-12-31 security/orthrus: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 security/py-backports.ssl_match_hostname: Uses Python 2.7 which is EOLed upstream
2020-12-31 security/sandsifter: Uses deprecated version of python, see https://github.com/rigred/sandsifter/issues/10
2020-12-31 sysutils/cinnamon-control-center: Uses Python 2.7 which is EOLed upstream
2020-12-31 sysutils/ori: Uses Python 2.7 version of scons, and Python 2.7 which is EOLed upstream
2020-12-31 sysutils/osquery: Uses Python 2.7 which is EOLed upstream
2020-12-31 sysutils/py-shutilwhich: Python 2 only, backport of Python 3
2020-12-31 sysutils/uefi-edk2-bhyve-csm: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/cliqz: Uses deprecated version of python
2020-12-31 www/iridium: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/moinmoin: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/node10: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/node12: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-OhlohWidgetsMacro: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-TracGoogleAnalytics: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-accountmanager: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-advancedticketworkflow: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-autocomplete: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-ccselector: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-customfieldadmin: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-datefield: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-defaultcc: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-devel: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-discussion: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-downloads: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-email2trac: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-email2trac-postfix: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-estimator: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-fivestarvote: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-fullblog: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-fullblognotification: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-graphviz: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-iniadmin: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-keywords: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-keywordsecretticket: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-ldap: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-ldapauthstore: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-math: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-mercurial: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-navadd: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-permredirect: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-privatetickets: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-pydotorgtheme: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-scrumburndown: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-spam-filter: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-subtickets: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-tags: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-themeengine: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-ticketimport: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-tickettemplate: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-timingandestimation: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-tocmacro: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-tweakui: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-vote: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-wikigoodies: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-wikinotification: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-wikitemplates: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-wikitopdf: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-wysiwyg: Uses Python 2.7 which is EOLed upstream
2020-12-31 www/trac-xmlrpc: Uses Python 2.7 which is EOLed upstream
2020-12-31 ./net/php72-soap: Security Support ends on 30 Nov 2020
2020-12-31 ./net/php72-sockets: Security Support ends on 30 Nov 2020
2020-12-31 ./net/php72-xmlrpc: Security Support ends on 30 Nov 2020
2020-12-31 ./net/php72-ldap: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-xmlwriter: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-pspell: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-enchant: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-wddx: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-xsl: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-dom: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-ctype: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-xml: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-simplexml: Security Support ends on 30 Nov 2020
2020-12-31 ./textproc/php72-xmlreader: Security Support ends on 30 Nov 2020
2020-12-31 ./graphics/php72-gd: Security Support ends on 30 Nov 2020
2020-12-31 ./graphics/php72-exif: Security Support ends on 30 Nov 2020
2020-12-31 ./mail/php72-imap: Security Support ends on 30 Nov 2020
2020-12-31 ./www/php72-opcache: Security Support ends on 30 Nov 2020
2020-12-31 ./www/mod_php72: Security Support ends on 30 Nov 2020
2020-12-31 ./www/php72-session: Security Support ends on 30 Nov 2020
2020-12-31 ./www/php72-tidy: Security Support ends on 30 Nov 2020
2020-12-31 ./security/php72-filter: Security Support ends on 30 Nov 2020
2020-12-31 ./security/php72-sodium: Security Support ends on 30 Nov 2020
2020-12-31 ./security/php72-hash: Security Support ends on 30 Nov 2020
2020-12-31 ./security/php72-openssl: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-shmop: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-tokenizer: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-sysvshm: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-gettext: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-readline: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-pcntl: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-json: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-sysvmsg: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-sysvsem: Security Support ends on 30 Nov 2020
2020-12-31 ./devel/php72-intl: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_sqlite: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_mysql: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pgsql: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_pgsql: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-odbc: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_odbc: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-mysqli: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-interbase: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_firebird: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-dba: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-pdo_dblib: Security Support ends on 30 Nov 2020
2020-12-31 ./databases/php72-sqlite3: Security Support ends on 30 Nov 2020
2020-12-31 ./ftp/php72-curl: Security Support ends on 30 Nov 2020
2020-12-31 ./ftp/php72-ftp: Security Support ends on 30 Nov 2020
2020-12-31 ./misc/php72-calendar: Security Support ends on 30 Nov 2020
2020-12-31 ./math/php72-bcmath: Security Support ends on 30 Nov 2020
2020-12-31 ./math/php72-gmp: Security Support ends on 30 Nov 2020
2020-12-31 ./archivers/php72-zip: Security Support ends on 30 Nov 2020
2020-12-31 ./archivers/php72-phar: Security Support ends on 30 Nov 2020
2020-12-31 ./archivers/php72-zlib: Security Support ends on 30 Nov 2020
2020-12-31 ./archivers/php72-bz2: Security Support ends on 30 Nov 2020
2020-12-31 ./net-mgmt/php72-snmp: Security Support ends on 30 Nov 2020
./lang/php72-extensions
2020-12-31 ./lang/php72: Security Support ends on 30 Nov 2020
2020-12-31 ./converters/php72-mbstring: Security Support ends on 30 Nov 2020
2020-12-31 ./converters/php72-recode: Security Support ends on 30 Nov 2020
2020-12-31 ./converters/php72-iconv: Security Support ends on 30 Nov 2020
2020-12-31 ./sysutils/php72-posix: Security Support ends on 30 Nov 2020
2020-12-31 ./sysutils/php72-fileinfo: Security Support ends on 30 Nov 2020
* Since r558913 the port fails to package. Adjust pkg-plist with new
PYTHON_EXT_SUFFIX variable introduced to python.mk in r559071 to remedy
the issue.
PR: 252057 (related)
Submitted by: portmgr (blanket: build fix)
/usr/local/include/wx-3.0/wx/strvararg.h:350: error: ISO C++ forbids declaration of 'is_enum' with no type
/usr/local/include/wx-3.0/wx/strvararg.h:350: error: typedef name may not be a nested-name-specifier
/usr/local/include/wx-3.0/wx/strvararg.h:350: error: expected ';' before '<' token
/usr/local/include/wx-3.0/wx/strvararg.h:354: error: 'is_enum' was not declared in this scope
/usr/local/include/wx-3.0/wx/strvararg.h:354: error: template argument 1 is invalid
While here, fix obvious typo in maintainer.
2020-12-12 textproc/py-hypua2jamo: Uses deprecated version of python
2020-12-12 devel/py-delfick_error: Uses deprecated version of python
2020-12-12 devel/py-fusefs: Uses deprecated version of python
2020-08-15 devel/py-noseofyeti: Uses deprecated version of python
2020-12-29 databases/py-bsddb: Uses deprecated version of python
2020-12-29 www/py-webhelpers: Uses deprecated version of python
2020-12-29 security/py-pyptlib: Uses deprecated version of python
2020-12-29 japanese/py-zinnia: Uses deprecated version of python
2020-12-29 math/slepc: Broken, uses deprecated version of python
2020-12-29 www/py-pastescript: Uses deprecated version of python
2020-12-29 databases/ldb14: Uses deprecated version of python
2020-12-29 math/py-slepc4py: Depends on broken and expiring math/slepc
2020-12-29 multimedia/py-kaa-base: Uses deprecated version of python
2020-12-29 devel/py-ydbf: Uses deprecated version of python
2020-12-29 devel/py-SymbolType: Uses deprecated version of python
Sunpoet Po-Chuan Hsieh
Matthias Andree
Antoine Brodin
Guido Falsi
Rene Ladan
Kurt Jaeger
Yuri Victorovich
Mark Linimon
Piotr Kubaj
Rainer Hurling
Kirill Ponomarev
Kai Knoblich
Gleb Popov
Jason E. Hale
Thierry Thomas
Guangyuan Yang
TAKATSU Tomonari