18c6e18276
Switch from Mk/bsd.ruby.mk to Mk/Uses/ruby.mk
Notable changes are.
- Mk/bsd.ruby.mk is moved to Mk/Uses/ruby.mk.
- USE_RUBY=yes is replaced with USES=ruby.
- USE_RUBY_EXTCONF is replaced with USES=ruby:extconf.
- USE_RUBY_RDOC is replaced with USES=ruby:rdoc.
- USE_RUBY_SETUP is replaces with USES=ruby:setup.
- RUBY_NO_BUILD_DEPENDS and RUBY_NO_RUN_DEPENDS are replaced with
USES=ruby:{build,none,run}.
- RUBY_REQUIRE isn't used anywhere, so removed.
- USES=gem now implies USES=ruby.
This is mainly the work of yasu@ at https://reviews.freebsd.org/D27863
I have just made some cosmetic changes and ran exp-run to test that the
tree is not in a BROKEN state.
Approved by: portmgr
Differential Revision: https://reviews.freebsd.org/D37925
48 lines
1.5 KiB
Makefile
48 lines
1.5 KiB
Makefile
PORTNAME= bio
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PORTVERSION= 1.5.1
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CATEGORIES= biology ruby
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MASTER_SITES= http://bioruby.org/archive/
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PKGNAMEPREFIX= ${RUBY_PKGNAMEPREFIX}
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DISTNAME= ${PORTNAME}ruby-${PORTVERSION}
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DIST_SUBDIR= ruby
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MAINTAINER= mauricio@arareko.net
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COMMENT= Integrated environment for Bioinformatics written in Ruby
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WWW= http://bioruby.org/
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LICENSE= GPLv2 RUBY
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LICENSE_COMB= dual
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OPTIONS_DEFINE= BDB4 MYSQL PGSQL DOCS
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BDB4_DESC= bdb4 support for faster flat file indexing
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NO_ARCH= yes
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USES= ruby:setup shebangfix
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SHEBANG_FILES= sample/biofetch.rb
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ruby_OLD_CMD= /usr/proj/bioruby/bin/ruby
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BDB4_RUN_DEPENDS= ${RUBY_SITEARCHLIBDIR}/bdb.so:databases/ruby-bdb
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MYSQL_RUN_DEPENDS= rubygem-dbd-mysql>=0:databases/rubygem-dbd-mysql
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PGSQL_RUN_DEPENDS= rubygem-dbd-pg>=0:databases/rubygem-dbd-pg
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CONFLICTS_INSTALL= rubygem-bio-shell
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post-patch:
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${RUBY} -i -pe 'gsub(%r"(/etc/bioinformatics/)") { "${PREFIX}" + $$1 }' \
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${WRKSRC}/doc/Tutorial.rd \
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${WRKSRC}/lib/bio/io/registry.rb
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do-install:
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@${MKDIR} ${STAGEDIR}${PREFIX}/etc/bioinformatics
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.for f in etc/bioinformatics/seqdatabase.ini
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${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/${f}.sample
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.endfor
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@${MKDIR} ${STAGEDIR}${RUBY_MODEXAMPLESDIR}
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${CP} -R ${WRKSRC}/sample/ ${STAGEDIR}${RUBY_MODEXAMPLESDIR}/
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@${MKDIR} ${STAGEDIR}${RUBY_MODDOCDIR}/ja
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${INSTALL_DATA} ${WRKSRC}/ChangeLog ${WRKSRC}/README.rdoc ${STAGEDIR}${RUBY_MODDOCDIR}/
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${INSTALL_DATA} ${WRKSRC}/doc/*.rd ${STAGEDIR}${RUBY_MODDOCDIR}/
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${INSTALL_DATA} ${WRKSRC}/doc/*.rd.ja ${STAGEDIR}${RUBY_MODDOCDIR}/ja/
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.include <bsd.port.mk>
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