Yuri Victorovich
42 lines
1.4 KiB
Makefile
42 lines
1.4 KiB
Makefile
PORTNAME= pysces
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DISTVERSION= 1.2.3
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CATEGORIES= biology python
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MASTER_SITES= PYPI
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PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Python Simulator for Cellular Systems
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WWW= https://pysces.github.io/
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LICENSE= BSD3CLAUSE
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LICENSE_FILE= ${WRKSRC}/LICENSE.txt
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BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}meson-python>0:devel/meson-python@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}numpy>=2.0.0,1:math/py-numpy@${PY_FLAVOR}
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RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.23.5,1:math/py-numpy@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}numdifftools>0:math/py-numdifftools@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}python-libsbml>0:biology/py-python-libsbml@${PY_FLAVOR}
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USES= fortran localbase:ldflags python
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USE_PYTHON= pep517 autoplist pytest
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LDFLAGS+= -lpython${PYTHON_VER}
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BINARY_ALIAS= python3=${PYTHON_CMD}
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TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
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post-install:
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@${STRIP_CMD} \
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${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pysces/pitcon/pitcon.cpython-${PYTHON_SUFFIX}.so \
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${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pysces/nleq2/nleq2.cpython-${PYTHON_SUFFIX}.so
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do-test: # from section 2.1 Loading PySCeS in http://pysces.sourceforge.net/pdf/userguide.pdf
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@${SETENV} ${TEST_ENV} ${PYTHON_CMD} -c "import pysces; pysces.test();"
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# tests as of 1.2.3: 30 tests passed
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.include <bsd.port.mk>
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