Dag-Erling Smørgrav
35 lines
945 B
Makefile
35 lines
945 B
Makefile
PORTNAME= seqkit
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DISTVERSIONPREFIX= v
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DISTVERSION= 2.13.0
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PORTREVISION= 3
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CATEGORIES= biology
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Cross-platform and ultrafast toolkit for FASTA/Q file manipulation
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WWW= https://bioinf.shenwei.me/seqkit \
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https://github.com/shenwei356/seqkit
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LICENSE= MIT
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LICENSE_FILE= ${WRKSRC}/LICENSE
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BROKEN_i386= compilation fails: vendor/github.com/ulikunitz/xz/lzma/reader.go:33:15: cannot use 1 << 31 (untyped int constant 2147483648) as int value in assignment (overflows)
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USES= go:1.24+,modules
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USE_GITHUB= nodefault
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GH_TUPLE= golang:sys:v0.6.0:sys
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GO_MODULE= github.com/shenwei356/seqkit/v2
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GO_TARGET= ./${PORTNAME}
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PLIST_FILES= bin/${PORTNAME}
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pre-patch:
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${RM} -r ${WRKSRC}/vendor/golang.org/x/sys
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${LN} -s ${WRKDIR}/sys-* ${WRKSRC}/vendor/golang.org/x/sys
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do-test: # from https://bioinf.shenwei.me/seqkit/benchmark/
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@cd ${WRKSRC}/tests && \
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${GO_WRKDIR_BIN}/seqkit stat *.fa
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.include <bsd.port.mk>
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