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Kai Knoblich 51b9e7c604 science/mcstas-comps: Update to 2.5 and unbreak 
While I'm here:

* Add post-install target to strip binary files and create symbolic links to
  ${PREFIX}/bin (derived from related port science/mcstas to keep in sync)
* Add shebang fix for sasview_generator.py

Changelog that lists the changes since 2.2a:

http://www.mcstas.org/download/CHANGES_McStas

PR:		234590
Submitted by:	Erik B. Knudsen (maintainer)
Reviewed by:	tcberner (mentor)
Approved by:	miwi (mentor)
Differential Revision:	https://reviews.freebsd.org/D19228
2019-02-20 22:34:23 +00:00
..
2d-rewriter
…
abinit
science/abinit: Update 8.8.4 -> 8.10.2
2019-02-10 00:30:17 +00:00
afni
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
agrum
Remove bogus dependency, agrum links against libomp from llvm port
2019-02-16 13:18:10 +00:00
aircraft-datcom
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
ALPSCore
science/ALPSCore: Mark broken on i386
2019-02-02 17:53:04 +00:00
antioch
Update math/eigen3 to 3.3.7
2018-12-26 09:06:34 +00:00
atom
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
atompaw
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
avogadro
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
avogadro2
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
avogadrolibs
Move: science/mmtf -> science/mmtf-cpp
2019-02-16 08:02:02 +00:00
bagel
science/bagel: Update 1.2.1 -> 1.2.2
2019-01-15 18:27:47 +00:00
bddsolve
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
berkeleygw
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
bodr
…
brian
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
buddy
…
cdcl
Add EXAMPLES options to ports that should have one.
2018-09-10 13:15:47 +00:00
cdf
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
cdo
Update to 1.9.6
2019-02-09 23:27:28 +00:00
cgnslib
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
cgribex
Update to 1.9.0
2019-02-05 13:48:25 +00:00
checkmol
- Add LLD_UNSAFE
2019-01-15 05:43:59 +00:00
chemical-mime-data
Release maintainership.
2018-12-09 15:14:35 +00:00
chemps2
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
chemtool
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
chemtool-devel
…
chrono
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
clhep
science/clhep: Update version 2.4.0.4=>2.4.1.0
2019-01-01 21:53:48 +00:00
clipper
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
code_saturne
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
colt
Mark as broken on powerpc64.
2018-06-08 02:35:17 +00:00
coordgenlibs
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
coot
science/coot: Remove the unused CONFIGURE_ARGS line
2019-01-17 05:59:38 +00:00
cp2k
science/cp2k: Remove contiguous blank lines
2019-01-26 05:23:51 +00:00
crf++
science/crf++: Fix build with Clang 6
2018-09-01 10:29:11 +00:00
dalton
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
datawarrior
science/datawarrior: Update 4.7.2 -> 5.0.0
2019-01-26 08:01:20 +00:00
dcl
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
devisor
…
dft_tools
Deprecate ports broken for more than 6 months
2019-02-03 20:46:35 +00:00
dftbplus
- science/dftbplus is not compatible with python3
2019-01-05 15:14:26 +00:00
dkh
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
dlib-cpp
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
dlpoly-classic
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
drawxtl
science/drawxtl: Unbreak on non-64-bit architectures
2018-12-22 07:59:38 +00:00
dvc
New port: science/dvc: Git for data scientists: manage code and data together
2019-02-18 19:37:36 +00:00
eccodes
Update to 2.12.0
2019-02-19 19:46:50 +00:00
elk
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
epte
…
erd
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
erkale
Remove bogus dependency, erkale links against libomp from llvm
2019-02-16 13:19:29 +00:00
erkale-pseudopotentials
New port: science/erkale-pseudopotentials: Pseudopotentials for Erkale, the quantum chemistry program
2019-01-17 09:42:53 +00:00
esys-particle
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
fastcap
…
fasthenry
…
fisicalab
Move Objective-C ports to the v2 GNUstep ABI.
2019-02-03 15:37:58 +00:00
fleur
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
fsom
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
fvcom
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
fvcom-mpi
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
gabedit
science/gabedit: Update 2.5.0 -> 2.5.1
2019-02-10 18:42:25 +00:00
gamess-us
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
gchemutils
This port needs USES=compiler:c++11-lang to build on GCC-based
2018-12-22 03:44:01 +00:00
gdma
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
getdp
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
ghemical
science/ghemical: fix build with GCC-based architectures
2018-12-23 18:08:26 +00:00
ghmm
…
gnudatalanguage
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
gpaw-setups
science/gpaw-setups: Update 0.9.11271 -> 0.9.20000
2018-11-21 06:01:05 +00:00
gramps
science/gramps: Update to 5.0.1
2019-02-04 14:14:38 +00:00
grib_api
Update to 1.28.0
2019-01-01 20:32:31 +00:00
gromacs
science/gromacs: Update 2019 -> 2019.1
2019-02-17 02:32:07 +00:00
gsmc
…
gtamsanalyzer
Move Objective-C ports to the v2 GNUstep ABI.
2019-02-03 15:37:58 +00:00
gwyddion
Update ilmbase and openexr to 2.3.0, rename OpenEXR to openexr.
2018-09-22 10:15:22 +00:00
h5utils
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
h5z-zfp
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
harminv
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
hdf
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
hdf5
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
hdf5-18
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
healpix
science/healpix: fix build with GCC-based architectures
2019-02-10 17:09:19 +00:00
hypre
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
iboview
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
InsightToolkit
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
isaac-cfd
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
jdftx
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
jmol
science/jmol: Add the executable jmoldata for headless operation
2019-02-13 10:21:20 +00:00
jstrack
Add DOCS options to ports that should have one.
2018-09-10 13:14:50 +00:00
kalzium
Update KDE Applications to 18.12.2
2019-02-08 05:11:13 +00:00
kst2
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
lammps
Update math/eigen3 to 3.3.7
2018-12-26 09:06:34 +00:00
lamprop
- Update to 3.8
2018-12-19 11:42:06 +00:00
latte
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
libaec
Update to 1.0.4
2019-02-12 21:03:10 +00:00
libccp4
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
libcint
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
libctl
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
libefp
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
libgeodecomp
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
libghemical
science/libghemical: fix build with GCC-based architectures
2018-12-17 17:51:21 +00:00
libgridxc
science/libgridxc: Update 0.8.4 -> 0.8.5
2019-02-17 02:24:01 +00:00
libint
science/libint: PORTSCOUT=limit
2018-08-30 17:24:44 +00:00
libint2
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
libkml
devel/boost-*: update to 1.69.0
2018-12-12 00:15:49 +00:00
liblinear
Reset MAINTAINER on ports maintained by amutu@amutu.com
2018-06-22 08:04:38 +00:00
libmsym
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
liboglappth
…
libquantum
…
libssm
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
libsvm
- Update pkg-descr
2018-10-13 14:26:24 +00:00
libsvm-python
…
libxc
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
liggghts
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
lm
science/lm: Do not set VMD_VARS twice
2019-01-17 06:24:51 +00:00
luscus
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
madness
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
maeparser
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
massxpert
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
mbdyn
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
mcstas
Cleanup RLN usage
2019-01-14 14:05:39 +00:00
mcstas-comps
science/mcstas-comps: Update to 2.5 and unbreak
2019-02-20 22:34:23 +00:00
mcxtrace
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
mcxtrace-comps
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
mdynamix
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
medit
…
meep
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
metaf2xml
…
metaphysicl
science/metaphysicl: Update 0.3.2 -> 0.3.3
2018-11-23 05:57:25 +00:00
minc2
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
mmdb2
science/mmdb2: Update 2.0.16 -> 2.0.19
2018-12-15 20:45:04 +00:00
mmtf-cpp
Move: science/mmtf -> science/mmtf-cpp
2019-02-16 08:02:02 +00:00
mol2ps
- Add LLD_UNSAFE
2019-01-15 05:44:58 +00:00
molgif
New port: science/molgif: Tool to create GIF animations of molecules
2018-10-07 21:54:19 +00:00
molscript
New port: science/molscript: Display 3D molecules in schematic and detailed representations
2019-02-13 07:00:58 +00:00
molsketch
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
MOOSE-neural-simulator
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
mpb
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
mpqc
science/mpqc: Change net/mpich2 -> net/mpich
2018-12-17 18:13:17 +00:00
msms
science/msms: Add back NO_WRKSUBDIR
2018-09-10 07:09:49 +00:00
multiwfn
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
namd
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
netcdf
Update to 4.6.2
2019-01-13 20:08:05 +00:00
netcdf-cxx
Change MASTER_SITES
2019-01-13 20:08:10 +00:00
netcdf-fortran
Update to 4.4.5
2019-01-13 20:08:15 +00:00
nifticlib
…
nwchem
New port: science/nwchem-data: Data for NWChem, the computational chemistry software
2019-01-26 22:00:10 +00:00
nwchem-data
New port: science/nwchem-data: Data for NWChem, the computational chemistry software
2019-01-26 22:00:10 +00:00
octopus
science/octopus: patches
2019-01-20 01:22:46 +00:00
openbabel
Update math/eigen3 to 3.3.7
2018-12-26 09:06:34 +00:00
openkim
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
openmx
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
opensim-core
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
openstructure
science/openstructure: python:2.7 for now
2019-02-16 19:05:32 +00:00
opsin
New port: science/opsin: Open Parser for Systematic IUPAC Nomenclature of chemical names
2019-02-14 00:54:56 +00:00
p5-Algorithm-SVMLight
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-3DBuilder
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-Bond-Find
- Add LICENSE
2018-10-09 09:08:39 +00:00
p5-Chemistry-Canonicalize
- Add LICENSE
2018-10-05 09:08:36 +00:00
p5-Chemistry-Elements
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-MDLMol
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-Mopac
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-PDB
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
2018-10-06 13:06:42 +00:00
p5-Chemistry-File-SLN
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-SMARTS
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-SMILES
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-VRML
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-File-XYZ
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-FormulaPattern
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-InternalCoords
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-Isotope
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-MacroMol
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
2018-10-06 13:06:42 +00:00
p5-Chemistry-MidasPattern
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-Mok
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-Mol
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
2018-10-06 13:06:42 +00:00
p5-Chemistry-Pattern
Update WWW
2018-05-27 20:15:16 +00:00
p5-Chemistry-Reaction
Update WWW
2018-07-29 19:26:49 +00:00
p5-Chemistry-Ring
Update WWW
2018-05-27 20:15:16 +00:00
p5-Geo-BUFR
Update to 1.37
2019-02-17 19:39:21 +00:00
p5-Geo-Coordinates-Converter
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
2018-10-06 13:06:42 +00:00
p5-Geo-Coordinates-Converter-iArea
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
2018-10-06 13:06:42 +00:00
p5-Geo-ReadGRIB
Update WWW
2018-05-27 20:15:16 +00:00
p5-Geo-WebService-Elevation-USGS
- Update to 0.110
2018-10-10 01:38:11 +00:00
p5-Mcstas-Tools
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
p5-PerlMol
science/p5-PerlMol: Do not set BUILD_DEPENDS twice
2019-01-08 16:00:58 +00:00
p5-Physics-Unit
Update WWW
2018-05-27 20:15:16 +00:00
paje
Move Objective-C ports to the v2 GNUstep ABI.
2019-02-03 15:37:58 +00:00
paraview
science/paraview: update to 5.6.0
2019-02-07 16:58:51 +00:00
pcmsolver
science/pcmsolver: Update 1.2.2 -> 1.2.3
2019-02-17 02:36:15 +00:00
PETSc
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
pnetcdf
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
psychopy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
pulseview
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
py-abipy
py-abipy is not compatible with python2
2019-02-04 21:07:51 +00:00
py-asdf
Update to 2.3.2
2019-02-20 20:47:15 +00:00
py-ase
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-avogadrolibs
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
py-cdo
Update to 1.4.0
2018-09-20 19:27:39 +00:00
py-chempy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-coards
Switch all pypi.python.org WWWs to a new PyPi home pypi.org where
2018-04-25 16:42:37 +00:00
py-DendroPy
Fix packaging with python 3.x
2018-10-12 14:58:58 +00:00
py-dlib
This port needs a newer GCC to build, so add USES=compiler:c++11-lang
2018-12-22 01:18:31 +00:00
py-gpaw
science/py-gpaw: Update 1.5.0 -> 1.5.1
2019-01-26 05:31:44 +00:00
py-GPy
New port: science/py-GPy: Gaussian process toolbox
2018-12-18 06:24:14 +00:00
py-GPyOpt
New port: science/py-GPyOpt: Bayesian optimization toolbox based on GPy
2018-12-18 06:36:16 +00:00
py-gsd
science/py-gsd: Update 1.5.5 -> 1.6.0
2018-12-21 05:02:15 +00:00
py-h5py
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
py-hcluster
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-kinematics
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-lifelines
science/py-lifelines: update to 0.17.0
2019-01-13 18:19:07 +00:00
py-MDAnalysis
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-MDAnalysisTests
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-mdp
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-mlpy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-mmtf-python
Use PY_FLAVOR for dependencies.
2018-06-20 17:05:41 +00:00
py-molmod
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-netCDF4
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
py-obspy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-oddt
New port: science/py-oddt: Open Drug Discovery Toolkit
2019-02-09 22:51:25 +00:00
py-OpenFermion
science/py-OpenFermion: Update 0.8 -> 0.9.0
2019-01-17 06:31:46 +00:00
py-openpiv
science/py-openpiv: Update to 0.21.0
2019-01-07 10:36:38 +00:00
py-paida
Use PY_FLAVOR for dependencies.
2018-06-20 17:05:41 +00:00
py-paramz
New port: science/py-paramz: Parameterization framework
2018-12-18 06:20:06 +00:00
py-phono3py
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-phonopy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pupynere
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pyaixi
Switch all pypi.python.org WWWs to a new PyPi home pypi.org where
2018-04-25 16:42:37 +00:00
py-pydicom
- Update to 1.2.2
2019-02-13 23:49:54 +00:00
py-PyFR
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pygeodesy
Fix build with Python 3
2018-12-08 15:43:07 +00:00
py-pymatgen
science/py-pymatgen: python-3 only
2019-02-04 19:53:14 +00:00
py-pymol
Unbreak INDEX
2019-02-16 10:32:12 +00:00
py-pyosf
Use PY_FLAVOR for dependencies.
2018-06-20 17:05:41 +00:00
py-PyQuante
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pysal
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pyteomics
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-pyteomics.biolccc
Switch all pypi.python.org WWWs to a new PyPi home pypi.org where
2018-04-25 16:42:37 +00:00
py-qspin
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-quantities
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-rmf
This port requires USES=compiler:c++11-lang to build on GCC-based
2019-01-12 23:32:09 +00:00
py-rmsd
science/py-rmsd: Fix CATEGORIES
2019-01-18 02:07:03 +00:00
py-ScientificPython
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-scikit-fuzzy
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-scikit-learn
science/py-scikit-learn: update to 0.20.2
2018-12-20 13:12:31 +00:00
py-scikit-sparse
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-scimath
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-scipy
- Update to 1.2.0
2019-01-01 08:56:25 +00:00
py-scoria
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-SimpleSpectral
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-spglib
science/py-spglib: Update 1.11.1 -> 1.12.0
2019-01-31 04:47:08 +00:00
py-veusz
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
py-ws2300
- Use MANPREFIX
2018-12-05 14:21:23 +00:00
pybrain
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
pycdf
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
pynn
- Update to 0.9.3
2019-01-14 03:26:29 +00:00
qbox
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
qcl
…
qmcpack
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
qtresistors
Mark QT4 ports/functionality for removal on 2019-03-15
2018-12-02 15:41:47 +00:00
quantum-espresso
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
quantum-espresso-pseudopotentials
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
qwalk
science/qwalk: Fix build with GCC-based architectures
2018-12-18 08:43:53 +00:00
R-cran-AMORE
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-bayesm
- Update to 3.1.1
2018-12-29 06:20:29 +00:00
R-cran-cmprsk
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-DCluster
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-e1071
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-eco
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-Epi
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-epicalc
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-etm
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-fastICA
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-kernlab
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-snow
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-som
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
R-cran-udunits2
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
rdkit
Update math/eigen3 to 3.3.7
2018-12-26 09:06:34 +00:00
rmf
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
rubygem-ai4r
…
rubygem-cdo
Update to 1.5.0
2019-02-16 22:54:45 +00:00
rubygem-rgeo
Update to 2.0.0
2018-11-30 20:04:16 +00:00
rubygem-rgeo-geojson
Update to 2.1.1
2018-11-29 16:45:08 +00:00
rubygem-rgeo-proj4
Update to 2.0.0
2018-11-30 20:04:25 +00:00
rubygem-rgeo-shapefile
Fix gemspec for rubygem-dbf 4.0.0 update
2019-01-06 20:41:11 +00:00
rubygem-ruby-dcl
Conditionalize the dependence of libunwind to x86-only to allow building
2019-01-24 05:09:48 +00:00
rubygem-ruby-netcdf
…
scidavis
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
siesta
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
sigrok-cli
science/sigrok-cli: Update to version 0.7.1
2018-11-03 12:53:26 +00:00
sigrok-firmware
…
sigrok-firmware-fx2lafw
Add DOCS options to ports that should have one.
2018-09-10 13:14:50 +00:00
sigrok-firmware-utils
Add DOCS options to ports that should have one.
2018-09-10 13:14:50 +00:00
silo
Update science/hdf5 to 1.10.4
2019-01-05 22:46:53 +00:00
simbody
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
simint
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
simlib
Remove compatibility code for FreeBSD < 11.2 from all ports.
2018-11-02 13:32:34 +00:00
simsmith
…
sparta
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
spglib
science/spglib: 1.11.2.1 -> 1.12.2
2019-02-10 01:33:34 +00:00
step
Update KDE Applications to 18.12.2
2019-02-08 05:11:13 +00:00
svmlight
…
szip
Update WWW
2019-02-17 19:38:55 +00:00
teem
Change cmake default behaviour to outsource.
2018-12-25 20:25:39 +00:00
tfel
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
tinker
science/tinker: Update 8.4.4 -> 8.5.3
2019-01-16 04:36:12 +00:00
triqs
Deprecate ports broken for more than 6 months
2019-02-03 20:46:35 +00:00
udunits
Install texinfo files (GNU info) into ${PREFIX}/share/info
2018-11-10 18:12:57 +00:00
v_sim
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
vipster
science/vipster: Update 1.14a -> 1.14.1a
2019-01-16 18:22:23 +00:00
vmd
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
voro++
science/voro++: Add shared library
2018-11-04 15:52:42 +00:00
wannier90
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
wxmacmolplt
New port: science/wxmacmolplt: Graphical user interface principally for the GAMESS program
2018-10-14 23:15:09 +00:00
xcrysden
Bump PORTREVISION for ports depending on the canonical version of GCC
2018-12-12 01:35:33 +00:00
xdrawchem
Fix Qt5 symbol version scripts to put the catch-all clause first. When
2019-01-16 11:13:44 +00:00
xfce4-equake-plugin
Clenup xfce ports:
2019-01-22 14:44:38 +00:00
xmakemol
…
yoda
science/yoda: Update 1.7.3 -> 1.7.4
2018-12-15 21:26:37 +00:00
Makefile
New port: science/dvc: Git for data scientists: manage code and data together
2019-02-18 19:37:36 +00:00