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Bartek Rutkowski 12920c84b4 science/orthanc: update 0.9.0 -> 0.9.1 
- Fix pkg-plist entries

PR:		201333
Submitted by:	Mikhail <mp39590@gmail.com> (maintainer)
2015-07-06 15:51:12 +00:00
..
2d-rewriter
Cleanup plist
2014-11-12 18:48:53 +00:00
afni
Convert to USES=jpeg
2015-06-22 18:33:20 +00:00
avogadro
Add patch to fix the build with CMake 3.2.
2015-06-15 21:49:52 +00:00
bddsolve
science/bddsolve: Set environment, use CXXFLAGS, cleanup
2015-02-25 12:01:52 +00:00
bft
…
bodr
Cleanup plist
2014-11-12 18:48:53 +00:00
brian
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
buddy
Remove Author from pkg-descr and white space fixes
2015-03-02 23:41:59 +00:00
cdcl
Cleanup plist
2014-11-12 18:48:53 +00:00
cdf
Cleanup DIST* variables.
2015-05-11 18:34:57 +00:00
cdo
- Update graphics/proj to 4.9.1
2015-06-15 13:03:11 +00:00
cgnslib
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
cgribex
- Use INSTALL_TARGET=install-strip instead of STRIP_CMD
2015-01-19 19:51:01 +00:00
checkmol
…
chemical-mime-data
Split devel/gettext in devel/gettext-runtime and devel/gettext-tools. The
2014-11-29 18:22:32 +00:00
chemtool
Cleanup plist
2014-11-12 18:48:53 +00:00
chemtool-devel
Cleanup plist
2014-11-12 18:48:53 +00:00
clhep
science/clhep: Update version 2.2.0.6=>2.2.0.8
2015-06-17 08:34:24 +00:00
colt
…
crf++
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
dcl
Cleanup plist
2014-11-12 18:48:53 +00:00
devisor
Cleanup plist
2014-11-12 18:48:53 +00:00
dlpoly-classic
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
ecs
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
epte
…
fastcap
Cleanup plist
2014-11-12 18:48:53 +00:00
fasthenry
Cleanup plist
2014-11-12 18:48:53 +00:00
fisicalab
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
fvcom
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
fvcom-mpi
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
fvm
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
gchemutils
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
getdp
Cleanup plist
2014-11-12 18:48:53 +00:00
ghemical
- Upadate biology/mopac to version 1.15
2014-12-16 22:10:23 +00:00
ghmm
Reset maintainership:
2014-12-02 22:40:56 +00:00
gnudatalanguage
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
gramps
sciense/gramps: drop dependency on py-xml
2015-06-20 09:54:35 +00:00
grib_api
- Update to 1.13.1
2015-06-15 14:42:53 +00:00
gromacs
- Update to 5.0.5
2015-05-19 01:59:50 +00:00
gsmc
Convert to USES=autoreconf
2015-06-21 13:40:06 +00:00
gtamsanalyzer
- Strip binary
2015-06-18 19:48:35 +00:00
gwyddion
- Update to 2.41
2015-06-30 20:25:55 +00:00
h5utils
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
harminv
- Switch to guile2
2015-03-10 20:45:19 +00:00
hdf
Convert to USES=jpeg
2015-06-22 18:33:20 +00:00
hdf5
- Use DISTVERSIONSUFFIX instead of DISTNAME
2015-06-13 11:11:52 +00:00
hdf-java
Convert to USES=jpeg
2015-06-22 18:33:20 +00:00
hs-bio
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
InsightToolkit
- Update to 4.7.2
2015-06-08 20:08:07 +00:00
isaac-cfd
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
jmol
Cleanup plist
2014-11-12 18:48:53 +00:00
jstrack
Change my non-FreeBSD MAINTAINER mail to bofh@
2014-12-24 00:14:11 +00:00
kalzium
Update KDE SC to 4.14.3
2015-03-11 23:11:47 +00:00
kst2
- Switch my ports to USE_QT4=linguisttools_build and adjust Qt components
2015-02-24 21:46:28 +00:00
lamprop
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
libctl
science/libctl: update to 3.2.2
2015-01-04 12:56:56 +00:00
libghemical
- Upadate biology/mopac to version 1.15
2014-12-16 22:10:23 +00:00
libint
science: Fix mpqc, libint and unbreak ghemical, and libghemical atomically
2014-09-25 11:04:02 +00:00
libkml
- Cleanup GH_* knobs:
2015-05-13 18:59:21 +00:00
liblinear
Cleanup DIST* variables.
2015-05-11 18:34:57 +00:00
liboglappth
Cleanup plist
2014-11-12 18:48:53 +00:00
libquantum
…
libsvm
Cleanup DIST* variables.
2015-05-11 18:34:57 +00:00
libsvm-python
Remove Author from pkg-descr and white space fixes
2015-03-02 23:41:59 +00:00
linsmith
Cleanup plist
2014-11-12 18:48:53 +00:00
massxpert
science/massxpert: Fix two logical errors (found by gcc5)
2015-03-22 00:06:34 +00:00
mbdyn
- Use blaslapack
2015-02-05 22:51:22 +00:00
mcstas
science/mcstas: USE_BISON is not used
2015-01-05 18:23:27 +00:00
mcstas-comps
New port: science/mcstas-comps
2015-01-05 09:38:16 +00:00
medit
cleanup plist
2014-12-20 19:35:10 +00:00
meep
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
mei
Cleanup plist
2014-11-12 18:48:53 +00:00
metaf2xml
Remove no longer needed patch, this completes r378490.
2015-02-10 20:17:17 +00:00
minc2
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
mol2ps
cleanup plist
2014-12-20 19:35:10 +00:00
mpb
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
mpqc
- Fix shebangs
2015-06-11 09:27:05 +00:00
mpqc-mpich
…
ncs
Upgrade ncs to 2.0.8 with its dependencies.
2015-05-14 17:31:29 +00:00
netcdf
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
netcdf-cxx
- Cleanup GH_* knobs: use DISTVERSIONPREFIX
2015-05-13 18:59:26 +00:00
netcdf-fortran
- Cleanup GH_* knobs:
2015-05-13 18:59:31 +00:00
nifticlib
…
openbabel
science/openbabel: Support gcc5 (taken from upstream)
2015-04-18 13:49:18 +00:00
openkim
Cleanup plist
2014-11-12 18:48:53 +00:00
orthanc
science/orthanc: update 0.9.0 -> 0.9.1
2015-07-06 15:51:12 +00:00
p5-Algorithm-SVMLight
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-3DBuilder
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Bond-Find
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Canonicalize
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Elements
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-MDLMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-Mopac
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-PDB
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SLN
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMARTS
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMILES
- Fix shebangs
2015-05-28 18:15:01 +00:00
p5-Chemistry-File-VRML
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-XYZ
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-FormulaPattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-InternalCoords
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Isotope
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-MacroMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-MidasPattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Mok
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Mol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Pattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Reaction
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Ring
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-BUFR
After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary,
2015-06-29 15:47:44 +00:00
p5-Geo-Coordinates-Converter
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
p5-Geo-Coordinates-Converter-iArea
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-ReadGRIB
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-WebService-Elevation-USGS
- Update to 0.102
2015-07-01 17:46:12 +00:00
p5-PerlMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Physics-Unit
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
paje
- Strip binaries
2015-06-18 19:49:14 +00:00
paraview
Convert to USES=jpeg
2015-06-22 18:33:20 +00:00
pnetcdf
- Update to 1.6.1
2015-06-02 18:38:28 +00:00
psychopy
science/psychopy: update to 1.82.01 and overhaul
2015-04-29 13:53:09 +00:00
pulseview
…
py-cdo
- Update to 1.2.6
2015-06-05 18:57:17 +00:00
py-coards
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-DendroPy
- Don't cat pkg-message from Makefiles
2015-05-27 00:15:04 +00:00
py-h5py
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
py-hcluster
Canonicalize some dependencies on numpy
2015-01-23 15:21:52 +00:00
py-mdp
Change my non-FreeBSD MAINTAINER mail to bofh@
2014-12-24 00:14:11 +00:00
py-mlpy
Canonicalize some dependencies on numpy
2015-01-23 15:21:52 +00:00
py-netCDF4
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
py-obspy
- Fix shebangs
2015-06-05 21:10:33 +00:00
py-paida
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pupynere
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pyaixi
Canonicalize a few licenses
2014-12-07 00:07:47 +00:00
py-pydap
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pydicom
- Fix shebangs
2015-06-05 21:10:18 +00:00
py-pysal
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
py-scikit-learn
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
py-scikit-sparse
scikits-sparse is a Python module for sparse matrix calculations.
2015-06-14 12:39:04 +00:00
py-scimath
- Unbreak
2015-03-14 15:07:54 +00:00
py-scipy
- Cleanup Makefile
2015-04-04 19:37:30 +00:00
py-ws2300
- Add missing files to plist
2015-06-05 21:10:48 +00:00
pybrain
Update ports in the s* categores to not use GH_COMMIT.
2015-05-07 17:41:23 +00:00
pycdf
- Strip library
2015-06-03 16:51:58 +00:00
pynn
Cleanup plist
2014-11-12 18:48:53 +00:00
pyteomics
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
pyteomics.biolccc
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
qcl
…
qtresistors
…
R-cran-AMORE
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-bayesm
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-DCluster
- Update to 0.2-7
2015-06-13 05:45:48 +00:00
R-cran-e1071
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-eco
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-Epi
- Update to 1.1.67
2015-06-13 06:04:57 +00:00
R-cran-epicalc
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-snow
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-som
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
rubygem-ai4r
Set NO_ARCH for remaining rubygem-* ports with no arch dependent files
2015-07-02 16:01:06 +00:00
rubygem-cdo
- Update to 1.2.5
2015-06-05 18:57:21 +00:00
rubygem-ruby-dcl
science/rubygem-ruby-dcl: Fix category.
2015-03-09 17:36:19 +00:00
rubygem-ruby-netcdf
- Move science/rubygem-netcdf to science/rubygem-ruby-netcdf
2015-05-24 15:35:51 +00:00
sigrok-cli
…
sigrok-firmware
Update ports in the s* categores to not use GH_COMMIT.
2015-05-07 17:41:23 +00:00
sigrok-firmware-fx2lafw
cleanup plist
2014-12-20 19:35:10 +00:00
sigrok-firmware-utils
Switch default python3 version from 3.3 to 3.4.
2015-01-10 23:15:27 +00:00
silo
- Update to 1.8.15
2015-05-24 08:10:28 +00:00
simlib
- Strip library
2015-05-17 14:43:37 +00:00
simsmith
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
step
Update KDE SC to 4.14.3
2015-03-11 23:11:47 +00:00
svmlight
- Add LICENSE
2015-03-07 03:18:42 +00:00
szip
- Use LIBS
2015-02-18 16:19:52 +00:00
udunits
- Update to 2.2.19
2015-04-03 17:28:32 +00:00
v_sim
Upgrade to 3.7.2.
2014-12-22 14:36:52 +00:00
veusz
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
vmd
3 ports categories: Remove $PTHREAD_LIBS
2015-03-24 22:17:41 +00:00
voro++
Cleanup plist
2014-11-12 18:48:53 +00:00
xfce4-equake-plugin
MASTER_SITES cleanup.
2015-05-14 10:15:04 +00:00
xmakemol
cleanup plist
2014-12-20 19:35:10 +00:00
Makefile
scikits-sparse is a Python module for sparse matrix calculations.
2015-06-14 12:39:04 +00:00