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math/py-yt: Update 3.6.1 -> 4.0.1

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Reported by:	portscout
This commit is contained in:
Yuri Victorovich
2021-08-02 22:30:06 -07:00
parent 3397fa3771
commit c36ae8bd1f
5 changed files with 38 additions and 22 deletions
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16
math/py-yt/Makefile
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@@ -1,7 +1,7 @@
# Created by: Yuri Victorovich <yuri@rawbw.com>
PORTNAME= yt
DISTVERSION= 3.6.1
DISTVERSION= 4.0.1
CATEGORIES= math astro python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -12,11 +12,19 @@ COMMENT= Analysis and visualization toolkit for volumetric data
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/COPYING.txt
# dependencies are in setup.cfg
BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sympy>=1.0:math/py-sympy@${PY_FLAVOR} \
RUN_DEPENDS= \
${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=1.5.3:math/py-matplotlib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}ipython5>=1.0:devel/ipython5@${PY_FLAVOR}
${PYTHON_PKGNAMEPREFIX}ipython5>=1.0:devel/ipython5@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=2.0.2:math/py-matplotlib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}more-itertools>=8.4:devel/py-more-itertools@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}packaging>=20.9:devel/py-packaging@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}sympy>=1.2:math/py-sympy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}toml>=0.10.2:textproc/py-toml@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tqdm>=3.4.0:misc/py-tqdm@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}unyt>=2.8.0:math/py-unyt@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}yaml>=4.2b1:devel/py-yaml@${PY_FLAVOR}
USES= dos2unix localbase python:3.7+
USE_PYTHON= distutils cython autoplist concurrent

6
math/py-yt/distinfo
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@@ -1,3 +1,3 @@
TIMESTAMP = 1605290212
SHA256 (yt-3.6.1.tar.gz) = be454f9d05dcbe0623328b4df43a1bfd1f0925e516be97399710452931a19bb0
SIZE (yt-3.6.1.tar.gz) = 11810361
TIMESTAMP = 1627935642
SHA256 (yt-4.0.1.tar.gz) = 6219cbf971871320a13679a57722c0363e50db5e6d4d64ea9d197461b2a7f70f
SIZE (yt-4.0.1.tar.gz) = 12588963

11
math/py-yt/files/patch-yt_extern_tqdm___utils.py
View File

@@ -1,11 +0,0 @@
--- yt/extern/tqdm/_utils.py.orig 2017-01-01 20:57:19 UTC
+++ yt/extern/tqdm/_utils.py
@@ -40,7 +40,7 @@ def _environ_cols_wrapper(): # pragma:
_environ_cols = _environ_cols_windows
if _environ_cols is None:
_environ_cols = _environ_cols_tput
- if current_os in ['Linux', 'Darwin'] or current_os.startswith('CYGWIN'):
+ if current_os in ['FreeBSD', 'Linux', 'Darwin'] or current_os.startswith('CYGWIN'):
_environ_cols = _environ_cols_linux
return _environ_cols

11
math/py-yt/files/patch-yt_utilities_lib_platform__dep.h
View File

@@ -1,11 +1,14 @@
--- yt/utilities/lib/platform_dep.h.orig 2017-01-01 20:57:35 UTC
--- yt/utilities/lib/platform_dep.h.orig 2021-08-02 20:27:17 UTC
+++ yt/utilities/lib/platform_dep.h
@@ -57,7 +57,7 @@ double erf(double x)
@@ -59,6 +59,10 @@ double erf(double x)
#else
#include <stdint.h>
-#include "alloca.h"
+#include <stdlib.h>
+#if !defined(__FreeBSD__)
+# include "alloca.h"
+#else
+# include <stdlib.h>
+#endif
#include <math.h>
#endif

16
math/py-yt/files/patch-yt_utilities_lib_platform__dep__math.hpp Normal file
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@@ -0,0 +1,16 @@
--- yt/utilities/lib/platform_dep_math.hpp.orig 2021-08-02 20:38:53 UTC
+++ yt/utilities/lib/platform_dep_math.hpp
@@ -5,6 +5,7 @@ MSVC does not define isnormal in the std:: namespace,
However with GCC-5, there is a clash between the definition of isnormal in <math.h> and using C++14, so we need to import from cmath instead.
*/
+#if !defined(__FreeBSD__) // see https://github.com/yt-project/yt/issues/3459
#if _MSC_VER
#include <math.h>
inline bool __isnormal(double x) {
@@ -15,4 +16,5 @@ inline bool __isnormal(double x) {
inline bool __isnormal(double x) {
return std::isnormal(x);
}
+#endif
#endif