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Add p5-Bio-Cluster 1.7.3

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Bio::Cluster is the BioPerl cluster modules. Classes and modules here describe
the basic structure for a cluster of BioPerl objects.

WWW: https://metacpan.org/release/Bio-Cluster
This commit is contained in:
Sunpoet Po-Chuan Hsieh
2019-02-20 20:46:37 +00:00
parent 206bd9a45b
commit dcf929510c
5 changed files with 55 additions and 0 deletions
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1
biology/Makefile
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@@ -77,6 +77,7 @@
SUBDIR += ngs-sdk
SUBDIR += p5-AcePerl
SUBDIR += p5-Bio-ASN1-EntrezGene
SUBDIR += p5-Bio-Cluster
SUBDIR += p5-Bio-Coordinate
SUBDIR += p5-Bio-Das
SUBDIR += p5-Bio-Das-Lite

27
biology/p5-Bio-Cluster/Makefile Normal file
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@@ -0,0 +1,27 @@
# Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org>
# $FreeBSD$
PORTNAME= Bio-Cluster
PORTVERSION= 1.7.3
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= BioPerl cluster modules
LICENSE= ART10 GPLv1+
LICENSE_COMB= dual
LICENSE_FILE= ${WRKSRC}/LICENSE
#TODO: Add Bio::Variation::SNP
BUILD_DEPENDS= ${RUN_DEPENDS}
RUN_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \
p5-XML-SAX>=0:textproc/p5-XML-SAX
USES= perl5
USE_PERL5= configure
NO_ARCH= yes
.include <bsd.port.mk>

3
biology/p5-Bio-Cluster/distinfo Normal file
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@@ -0,0 +1,3 @@
TIMESTAMP = 1549712664
SHA256 (Bio-Cluster-1.7.3.tar.gz) = 1967fb3899b92f245b5bf6cb64ef076fc3f8427b1a96ca5f7b74d220b6191fbb
SIZE (Bio-Cluster-1.7.3.tar.gz) = 58304

4
biology/p5-Bio-Cluster/pkg-descr Normal file
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@@ -0,0 +1,4 @@
Bio::Cluster is the BioPerl cluster modules. Classes and modules here describe
the basic structure for a cluster of BioPerl objects.
WWW: https://metacpan.org/release/Bio-Cluster

20
biology/p5-Bio-Cluster/pkg-plist Normal file
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@@ -0,0 +1,20 @@
%%SITE_PERL%%/Bio/Cluster.pm
%%SITE_PERL%%/Bio/Cluster/ClusterFactory.pm
%%SITE_PERL%%/Bio/Cluster/FamilyI.pm
%%SITE_PERL%%/Bio/Cluster/SequenceFamily.pm
%%SITE_PERL%%/Bio/Cluster/UniGene.pm
%%SITE_PERL%%/Bio/Cluster/UniGeneI.pm
%%SITE_PERL%%/Bio/ClusterI.pm
%%SITE_PERL%%/Bio/ClusterIO.pm
%%SITE_PERL%%/Bio/ClusterIO/dbsnp.pm
%%SITE_PERL%%/Bio/ClusterIO/unigene.pm
%%PERL5_MAN3%%/Bio::Cluster.3.gz
%%PERL5_MAN3%%/Bio::Cluster::ClusterFactory.3.gz
%%PERL5_MAN3%%/Bio::Cluster::FamilyI.3.gz
%%PERL5_MAN3%%/Bio::Cluster::SequenceFamily.3.gz
%%PERL5_MAN3%%/Bio::Cluster::UniGene.3.gz
%%PERL5_MAN3%%/Bio::Cluster::UniGeneI.3.gz
%%PERL5_MAN3%%/Bio::ClusterI.3.gz
%%PERL5_MAN3%%/Bio::ClusterIO.3.gz
%%PERL5_MAN3%%/Bio::ClusterIO::dbsnp.3.gz
%%PERL5_MAN3%%/Bio::ClusterIO::unigene.3.gz