Files
ports/biology/subread/files/patch-HelperFunctions.c
T
Jason W. Bacon a156fdcf52 biology/subread: Read alignment, quantification and mutation discovery
The Subread package comprises a suite of software programs for processing
next-gen sequencing read data including:

    Subread: a general-purpose read aligner
    Subjunc: a read aligner developed for aligning RNA-seq reads
    featureCounts: a software program developed for counting reads to genomic
    features such as genes, exons, promoters and genomic bins.
    Sublong: a long-read aligner that is designed based on seed-and-vote.
    exactSNP: discovers SNPs by testing signals against local background noise.
2020-06-05 01:55:49 +00:00

21 lines
458 B
C

--- HelperFunctions.c.orig 2020-06-04 23:58:40 UTC
+++ HelperFunctions.c
@@ -845,7 +845,7 @@ int strcmp_number(char * s1, char * s2)
int mac_str(char * str_buff)
{
-#if defined(FREEBSD) || defined(__MINGW32__)
+#if defined(__FreeBSD__) || defined(__MINGW32__)
return 1;
#else
#ifdef MACOS
@@ -2703,7 +2703,7 @@ void main(){
int get_free_total_mem(size_t * total, size_t * free_mem){
-#ifdef FREEBSD
+#ifdef __FreeBSD__
return -1;
#endif